Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV13-2A0A0B4J235 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV13-2A0A0B4J235 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 SMUG1P1-201ENST00000590640 811 ntBASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV13-2A0A0B4J235 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 OR6D1P-203ENST00000641209 4860 ntBASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV13-2A0A0B4J235 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms