Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV5A0A0B4J1U4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 AC073314.1-201ENST00000568729 2216 ntBASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV5A0A0B4J1U4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRGV5A0A0B4J1U4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRGV5A0A0B4J1U4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AC087499.1-201ENST00000418141 1075 ntBASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
TRGV5A0A0B4J1U4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 AC133561.5-201ENST00000635547 218 ntBASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 AL031985.4-201ENST00000642138 673 ntBASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV5A0A0B4J1U4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 UNC93B2-201ENST00000285383 730 ntBASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 AP005212.1-201ENST00000581547 1997 ntBASIC17.68■□□□□ 0.42
TRGV5A0A0B4J1U4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 AP001271.2-201ENST00000624018 1556 ntBASIC17.67■□□□□ 0.42
TRGV5A0A0B4J1U4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms