Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPS17P17-201ENST00000419392 409 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AL161636.2-201ENST00000445179 927 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC005077.1-201ENST00000449226 375 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC011476.1-201ENST00000466725 307 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC009120.3-201ENST00000563335 499 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC092121.1-201ENST00000569452 202 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AP005119.1-201ENST00000580956 292 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 LINC01616-201ENST00000561816 2280 ntBASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM9SF3Q9HD45 ZNF101P1-201ENST00000435701 1720 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 OR52B3P-201ENST00000314715 928 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 U3.43-201ENST00000410734 213 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 TMA16P2-201ENST00000413187 601 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RPS7P8-201ENST00000418311 581 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RPL35AP31-201ENST00000418340 337 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC079355.1-201ENST00000421770 223 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RPL12P12-201ENST00000424633 501 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC021876.1-201ENST00000425959 359 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RN7SL193P-201ENST00000491708 276 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC105420.1-201ENST00000504389 582 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 SCARNA18.1-201ENST00000516330 83 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC024589.2-201ENST00000605642 1294 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC126175.1-201ENST00000617041 758 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC096708.4-201ENST00000620563 552 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC105235.1-201ENST00000623208 1816 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC024651.2-201ENST00000562480 2098 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 AC022325.1-201ENST00000502748 2199 ntBASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TM9SF3Q9HD45 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 MIR323A-201ENST00000362199 86 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 RN7SKP161-201ENST00000411110 305 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 MSL3P1-202ENST00000440028 1468 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 AC009237.1-201ENST00000442127 744 ntBASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.12□□□□□ -1.43
TM9SF3Q9HD45 FTLP8-201ENST00000446770 267 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms