Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 CTNNA1P1-201ENST00000515849 2728 ntBASIC9.52□□□□□ -0.89
IFT140Q96RY7 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
IFT140Q96RY7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.52□□□□□ -0.89
IFT140Q96RY7 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 AL590004.4-201ENST00000566733 7060 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 AP002364.1-201ENST00000623330 3386 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 AP004289.1-201ENST00000436307 2205 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 AC062029.1-202ENST00000606164 3651 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 FAM32BP-201ENST00000344033 333 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 HNRNPA3P4-201ENST00000427514 803 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 LDHAP2-201ENST00000437325 985 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 RPS3AP53-201ENST00000454716 778 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 OR13C1P-201ENST00000457612 963 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.51□□□□□ -0.89
IFT140Q96RY7 NMNAT1P5-201ENST00000559657 841 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
IFT140Q96RY7 IMMTP1-201ENST00000435590 2219 ntBASIC9.51□□□□□ -0.89
IFT140Q96RY7 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
IFT140Q96RY7 AC011493.1-201ENST00000596753 1632 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 MROH3P-201ENST00000435735 2676 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 SNORA67-201ENST00000384423 137 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 MIR130A-201ENST00000385274 89 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 DSTNP5-201ENST00000427921 523 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 AC011753.3-201ENST00000443436 406 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 AL355974.3-201ENST00000617383 467 ntBASIC9.5□□□□□ -0.89
IFT140Q96RY7 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
IFT140Q96RY7 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
IFT140Q96RY7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
IFT140Q96RY7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
IFT140Q96RY7 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
IFT140Q96RY7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC009831.5-201ENST00000624000 3189 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC078878.1-201ENST00000539832 958 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 PCNPP1-201ENST00000552501 511 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC106730.2-201ENST00000566641 540 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 RBM22P1-201ENST00000578589 1214 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.49□□□□□ -0.89
IFT140Q96RY7 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC114947.2-201ENST00000565748 2125 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 AC002090.1-201ENST00000625000 2138 ntBASIC9.49□□□□□ -0.89
IFT140Q96RY7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
IFT140Q96RY7 MIR192-201ENST00000384915 110 ntBASIC9.48□□□□□ -0.89
IFT140Q96RY7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.48□□□□□ -0.89
IFT140Q96RY7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms