Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 AMYP1-201ENST00000440059 1023 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC098847.1-201ENST00000473094 348 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 RPL23AP40-201ENST00000487630 390 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 LDHAP1-201ENST00000509421 992 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC008429.4-201ENST00000521201 182 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 TPM3P3-201ENST00000521343 354 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS35Q96QK1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC134669.1-201ENST00000581275 672 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6□□□□□ -1.45
VPS35Q96QK1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC090236.2-201ENST00000587933 1101 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 AL499605.1-201ENST00000604628 403 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 AC004890.3-201ENST00000605566 1095 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 AC018690.1-201ENST00000608144 626 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 AC245014.3-201ENST00000618589 347 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 CASC19-238ENST00000641523 1558 ntBASIC6□□□□□ -1.45
VPS35Q96QK1 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6□□□□□ -1.45
VPS35Q96QK1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6□□□□□ -1.45
VPS35Q96QK1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6□□□□□ -1.45
VPS35Q96QK1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS35Q96QK1 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6□□□□□ -1.45
VPS35Q96QK1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 QRSL1P1-201ENST00000400977 1540 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 RNA5SP433-201ENST00000364491 114 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 RN7SKP275-201ENST00000364626 301 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AL445466.1-201ENST00000448432 357 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC005077.1-201ENST00000449226 375 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AL035690.1-201ENST00000490892 383 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC083795.1-201ENST00000491760 320 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AP003396.4-201ENST00000527574 265 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC007956.1-201ENST00000555623 542 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC007494.1-201ENST00000562293 760 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AP005119.1-201ENST00000580956 292 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC024884.1-201ENST00000620583 399 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AL512356.3-201ENST00000623005 461 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC025262.3-201ENST00000623666 360 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 AC092070.2-203ENST00000598377 3644 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 LYARP1-201ENST00000436977 1501 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 RBPJP7-201ENST00000442803 1447 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 RBPJP5-201ENST00000449433 1447 ntBASIC5.99□□□□□ -1.45
VPS35Q96QK1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
VPS35Q96QK1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms