Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 OR9A1P-202ENST00000484361 945 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 RPL29P23-201ENST00000486188 442 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL117692.1-201ENST00000494283 713 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC090058.1-201ENST00000498788 435 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC119751.4-201ENST00000507498 357 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 OR7E10P-201ENST00000526420 991 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 OR4A41P-201ENST00000533053 928 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 NPM1P5-201ENST00000557228 838 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 MIR4760-201ENST00000585040 80 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 OR1AB1P-201ENST00000585564 761 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL359091.2-201ENST00000609303 556 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 SNORA16A-202ENST00000628458 135 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 CASC19-228ENST00000641414 1684 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL731532.1-201ENST00000623972 4236 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 MTND4P9-201ENST00000507819 1346 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 SNORD8-201ENST00000363915 110 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 RN7SKP187-201ENST00000365536 330 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 MRPS6P2-201ENST00000381143 370 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 RNU1-46P-201ENST00000384425 164 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL356057.1-202ENST00000402263 756 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL049697.3-201ENST00000406493 982 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC116036.1-201ENST00000412199 367 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC096644.3-201ENST00000416788 338 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 COL11A2P1-205ENST00000441798 676 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC236972.4-201ENST00000458091 963 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC016550.1-201ENST00000505348 785 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL162632.2-201ENST00000553933 399 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 CKS1BP1-201ENST00000555221 240 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 ABI1P1-201ENST00000603375 1120 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 LSM1P2-201ENST00000604911 322 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL450270.1-201ENST00000606160 391 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AL162377.2-201ENST00000624532 337 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 AP001052.1-201ENST00000626421 99 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS50Q96JG6 AC024651.2-201ENST00000562480 2098 ntBASIC6.24□□□□□ -1.41
VPS50Q96JG6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS50Q96JG6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms