Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RSPO4Q2I0M5 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC217777.1-201ENST00000570034 1471 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 SSX9-201ENST00000376909 591 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ERHP2-201ENST00000402323 299 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 RPL7P8-201ENST00000411964 730 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL161631.1-201ENST00000417933 486 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC092427.1-201ENST00000439177 601 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 BX005266.3-201ENST00000443013 1075 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC234771.2-201ENST00000445718 597 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC108463.1-201ENST00000450258 347 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 KATNBL1P6-201ENST00000453433 915 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL591122.1-201ENST00000487348 492 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ARL2BPP4-201ENST00000506854 471 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 Y_RNA.675-201ENST00000516389 149 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 OR5AK1P-201ENST00000524837 922 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MIR4637-201ENST00000582405 84 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC097641.3-201ENST00000613523 464 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL590410.1-201ENST00000617925 333 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC010338.1-201ENST00000621823 717 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC009033.1-201ENST00000624279 431 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AC112487.2-201ENST00000637950 304 ntBASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RSPO4Q2I0M5 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 TRIM60P19-201ENST00000452879 1462 ntBASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 AL645937.1-201ENST00000641739 1652 ntBASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 RN7SKP191-201ENST00000364713 306 ntBASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 SNORA7A-201ENST00000384765 139 ntBASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 MIR555-201ENST00000384987 96 ntBASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.17□□□□□ -1.26
RSPO4Q2I0M5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms