Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.82□□□□□ -1.16
CALD1Q05682 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CALD1Q05682 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.82□□□□□ -1.16
CALD1Q05682 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CALD1Q05682 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 PSG10P-201ENST00000501199 1500 ntBASIC7.82□□□□□ -1.16
CALD1Q05682 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CALD1Q05682 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CALD1Q05682 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
CALD1Q05682 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.81□□□□□ -1.16
CALD1Q05682 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.81□□□□□ -1.16
CALD1Q05682 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 RNFT1P3-201ENST00000340898 1052 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 RNA5SP211-201ENST00000365516 117 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 U3.23-201ENST00000391132 200 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AL096711.1-201ENST00000404780 554 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AL451046.1-201ENST00000406097 534 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 SNRPEP6-201ENST00000407465 277 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 RN7SKP240-201ENST00000410583 375 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 MRPS21P2-201ENST00000424704 264 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AC021876.1-201ENST00000425959 359 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.81□□□□□ -1.16
CALD1Q05682 VN1R110P-201ENST00000438988 971 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 RPS7P3-201ENST00000443360 580 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 CUBNP2-201ENST00000443534 1139 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AL359839.1-201ENST00000451975 1160 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 SDC4P-201ENST00000453285 601 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 CST12P-201ENST00000457644 362 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 RN7SL269P-201ENST00000467795 305 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.81□□□□□ -1.16
CALD1Q05682 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.81□□□□□ -1.16
CALD1Q05682 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.81□□□□□ -1.16
CALD1Q05682 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.81□□□□□ -1.16
CALD1Q05682 AC090826.1-203ENST00000569235 490 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.81□□□□□ -1.16
CALD1Q05682 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
CALD1Q05682 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 AL591135.1-201ENST00000401578 5914 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 AC140134.1-201ENST00000511830 3544 ntBASIC7.81□□□□□ -1.16
CALD1Q05682 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CALD1Q05682 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CALD1Q05682 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.81□□□□□ -1.16
CALD1Q05682 BRAFP1-201ENST00000445336 2703 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CALD1Q05682 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 AL121768.1-201ENST00000613917 2544 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 AC092070.2-203ENST00000598377 3644 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
CALD1Q05682 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.8□□□□□ -1.16
CALD1Q05682 SELENOWP1-201ENST00000322792 252 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 SUGT1P2-201ENST00000379452 992 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CALD1Q05682 RAB5CP1-201ENST00000395972 580 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 AL445928.1-201ENST00000435545 222 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 RPSAP41-201ENST00000439695 860 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.8□□□□□ -1.16
CALD1Q05682 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.8□□□□□ -1.16
CALD1Q05682 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 AL445687.2-201ENST00000458156 728 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 AL122020.1-201ENST00000472287 459 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 AC008629.2-201ENST00000503783 483 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.8□□□□□ -1.16
CALD1Q05682 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CALD1Q05682 WBP1LP3-201ENST00000523033 208 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 HMGN2P47-201ENST00000559378 272 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC7.8□□□□□ -1.16
CALD1Q05682 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.8□□□□□ -1.16
CALD1Q05682 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.8□□□□□ -1.16
CALD1Q05682 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.8□□□□□ -1.16
CALD1Q05682 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.8□□□□□ -1.16
CALD1Q05682 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.8□□□□□ -1.16
CALD1Q05682 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CALD1Q05682 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
CALD1Q05682 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.8□□□□□ -1.16
CALD1Q05682 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CALD1Q05682 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms