Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.41□□□□□ -1.22
MRE11P49959 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 RPL21P33-201ENST00000444831 484 ntBASIC7.41□□□□□ -1.22
MRE11P49959 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 AC018797.1-201ENST00000510791 255 ntBASIC7.41□□□□□ -1.22
MRE11P49959 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 AP001372.4-201ENST00000524889 472 ntBASIC7.41□□□□□ -1.22
MRE11P49959 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 AL356986.1-201ENST00000604085 341 ntBASIC7.41□□□□□ -1.22
MRE11P49959 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 AC097504.2-201ENST00000608088 454 ntBASIC7.41□□□□□ -1.22
MRE11P49959 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.41□□□□□ -1.22
MRE11P49959 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 SNORA16A-202ENST00000628458 135 ntBASIC7.41□□□□□ -1.22
MRE11P49959 AL132640.3-201ENST00000630473 177 ntBASIC7.41□□□□□ -1.22
MRE11P49959 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 OR7E161P-202ENST00000641994 1033 ntBASIC7.41□□□□□ -1.22
MRE11P49959 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 AC092692.1-201ENST00000623625 2595 ntBASIC7.41□□□□□ -1.22
MRE11P49959 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 AC018628.1-201ENST00000624147 3819 ntBASIC7.4□□□□□ -1.22
MRE11P49959 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MRE11P49959 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MRE11P49959 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
MRE11P49959 RNU1-55P-201ENST00000365510 158 ntBASIC7.4□□□□□ -1.22
MRE11P49959 PPIAP26-201ENST00000377951 522 ntBASIC7.4□□□□□ -1.22
MRE11P49959 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
MRE11P49959 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.4□□□□□ -1.22
MRE11P49959 AL357078.2-201ENST00000416486 427 ntBASIC7.4□□□□□ -1.22
MRE11P49959 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MRE11P49959 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 AL590623.1-201ENST00000427864 105 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AL161626.1-201ENST00000441480 490 ntBASIC7.4□□□□□ -1.22
MRE11P49959 E2F6P3-201ENST00000441743 743 ntBASIC7.4□□□□□ -1.22
MRE11P49959 POU5F1P5-201ENST00000445059 658 ntBASIC7.4□□□□□ -1.22
MRE11P49959 RAB28P2-201ENST00000454299 641 ntBASIC7.4□□□□□ -1.22
MRE11P49959 RPL7L1P3-201ENST00000455249 689 ntBASIC7.4□□□□□ -1.22
MRE11P49959 MED28P7-201ENST00000456611 530 ntBASIC7.4□□□□□ -1.22
MRE11P49959 RN7SL284P-201ENST00000498823 275 ntBASIC7.4□□□□□ -1.22
MRE11P49959 UBE2V1P12-201ENST00000503954 474 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC098862.1-201ENST00000504991 413 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC016550.1-201ENST00000505348 785 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC091965.3-201ENST00000506236 208 ntBASIC7.4□□□□□ -1.22
MRE11P49959 SNX18P25-201ENST00000510539 758 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.4□□□□□ -1.22
MRE11P49959 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.4□□□□□ -1.22
MRE11P49959 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.4□□□□□ -1.22
MRE11P49959 AL121594.4-201ENST00000556211 1196 ntBASIC7.4□□□□□ -1.22
MRE11P49959 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
MRE11P49959 AC012368.3-201ENST00000604190 219 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC015849.6-201ENST00000605454 474 ntBASIC7.4□□□□□ -1.22
MRE11P49959 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.4□□□□□ -1.22
MRE11P49959 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MRE11P49959 AC016542.3-201ENST00000623520 619 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC068213.1-201ENST00000625124 226 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AC140479.4-205ENST00000636339 820 ntBASIC7.4□□□□□ -1.22
MRE11P49959 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MRE11P49959 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MRE11P49959 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.4□□□□□ -1.23
MRE11P49959 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MRE11P49959 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MRE11P49959 AL359955.1-201ENST00000455242 3275 ntBASIC7.4□□□□□ -1.23
MRE11P49959 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
MRE11P49959 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
MRE11P49959 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MRE11P49959 OR4G1P-202ENST00000641173 1788 ntBASIC7.39□□□□□ -1.23
MRE11P49959 AL512329.1-201ENST00000404600 1592 ntBASIC7.39□□□□□ -1.23
MRE11P49959 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.39□□□□□ -1.23
MRE11P49959 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 AC007618.1-201ENST00000366455 732 ntBASIC7.39□□□□□ -1.23
MRE11P49959 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MRE11P49959 SNORA7A-201ENST00000384765 139 ntBASIC7.39□□□□□ -1.23
MRE11P49959 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MRE11P49959 NPM1P37-201ENST00000403105 874 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms