Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CENPAP49450 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.77□□□□□ -1.49
CENPAP49450 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.77□□□□□ -1.49
CENPAP49450 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.77□□□□□ -1.49
CENPAP49450 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.77□□□□□ -1.49
CENPAP49450 AC245052.7-201ENST00000601161 359 ntBASIC5.77□□□□□ -1.49
CENPAP49450 AL671309.1-201ENST00000603750 544 ntBASIC5.77□□□□□ -1.49
CENPAP49450 AC024933.1-201ENST00000608472 348 ntBASIC5.77□□□□□ -1.49
CENPAP49450 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.77□□□□□ -1.49
CENPAP49450 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.77□□□□□ -1.49
CENPAP49450 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.77□□□□□ -1.49
CENPAP49450 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CENPAP49450 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.77□□□□□ -1.49
CENPAP49450 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.77□□□□□ -1.49
CENPAP49450 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CENPAP49450 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CENPAP49450 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.77□□□□□ -1.49
CENPAP49450 AC087516.1-201ENST00000561236 2428 ntBASIC5.77□□□□□ -1.49
CENPAP49450 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.77□□□□□ -1.49
CENPAP49450 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CENPAP49450 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CENPAP49450 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CENPAP49450 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CENPAP49450 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.77□□□□□ -1.49
CENPAP49450 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CENPAP49450 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.76□□□□□ -1.49
CENPAP49450 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 HSPD1P7-201ENST00000447985 1686 ntBASIC5.76□□□□□ -1.49
CENPAP49450 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 AC009220.2-201ENST00000489759 1751 ntBASIC5.76□□□□□ -1.49
CENPAP49450 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CENPAP49450 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CENPAP49450 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.76□□□□□ -1.49
CENPAP49450 RNA5SP478-201ENST00000364657 115 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AL590635.1-201ENST00000406314 586 ntBASIC5.76□□□□□ -1.49
CENPAP49450 TRIM60P17-201ENST00000415181 719 ntBASIC5.76□□□□□ -1.49
CENPAP49450 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.76□□□□□ -1.49
CENPAP49450 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 MTND2P9-201ENST00000422293 931 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AL034379.1-201ENST00000423216 253 ntBASIC5.76□□□□□ -1.49
CENPAP49450 SEC63P1-201ENST00000425785 1258 ntBASIC5.76□□□□□ -1.49
CENPAP49450 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 AC023141.6-201ENST00000429418 337 ntBASIC5.76□□□□□ -1.49
CENPAP49450 GTF3AP6-201ENST00000432585 986 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 BMS1P11-201ENST00000442351 885 ntBASIC5.76□□□□□ -1.49
CENPAP49450 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.76□□□□□ -1.49
CENPAP49450 BMS1P9-201ENST00000457640 885 ntBASIC5.76□□□□□ -1.49
CENPAP49450 RPL7AP30-201ENST00000482859 796 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC090543.1-201ENST00000492168 485 ntBASIC5.76□□□□□ -1.49
CENPAP49450 NPM1P28-201ENST00000492269 840 ntBASIC5.76□□□□□ -1.49
CENPAP49450 RPL5P14-201ENST00000494197 878 ntBASIC5.76□□□□□ -1.49
CENPAP49450 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.76□□□□□ -1.49
CENPAP49450 AC106806.2-201ENST00000509365 500 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC134698.1-201ENST00000511619 643 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 SCARNA11.1-201ENST00000516918 132 ntBASIC5.76□□□□□ -1.49
CENPAP49450 FTH1P11-201ENST00000517577 551 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CENPAP49450 AP002004.1-206ENST00000532441 876 ntBASIC5.76□□□□□ -1.49
CENPAP49450 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.76□□□□□ -1.49
CENPAP49450 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.76□□□□□ -1.49
CENPAP49450 PPATP2-201ENST00000605635 508 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC024255.1-201ENST00000614376 102 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC006453.3-201ENST00000635891 377 ntBASIC5.76□□□□□ -1.49
CENPAP49450 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.76□□□□□ -1.49
CENPAP49450 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 AC068769.1-201ENST00000474767 2426 ntBASIC5.76□□□□□ -1.49
CENPAP49450 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 AC027228.2-201ENST00000567141 2154 ntBASIC5.76□□□□□ -1.49
CENPAP49450 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 CASC19-238ENST00000641523 1558 ntBASIC5.76□□□□□ -1.49
CENPAP49450 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CENPAP49450 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CENPAP49450 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CENPAP49450 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms