Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD4P46934 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD4P46934 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 COX6CP7-201ENST00000597056 208 ntBASIC6.91□□□□□ -1.3
NEDD4P46934 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.91□□□□□ -1.3
NEDD4P46934 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NEDD4P46934 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.91□□□□□ -1.3
NEDD4P46934 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.91□□□□□ -1.3
NEDD4P46934 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.91□□□□□ -1.3
NEDD4P46934 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
NEDD4P46934 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.9□□□□□ -1.3
NEDD4P46934 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 BRAFP1-201ENST00000445336 2703 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.9□□□□□ -1.3
NEDD4P46934 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.9□□□□□ -1.3
NEDD4P46934 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.9□□□□□ -1.3
NEDD4P46934 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
NEDD4P46934 SNORA11.3-201ENST00000408471 128 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AC245060.4-201ENST00000413293 1121 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 AL035660.1-201ENST00000422041 222 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AC127526.2-201ENST00000426436 775 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC073109.1-201ENST00000445066 978 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AP006222.1-205ENST00000450734 457 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 HMGN2P36-201ENST00000529541 409 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.9□□□□□ -1.3
NEDD4P46934 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NEDD4P46934 ZNF322P1-201ENST00000568013 1209 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AC015802.2-201ENST00000589690 189 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 MIR6861-201ENST00000618657 64 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 SNORA11.6-201ENST00000619030 128 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.9□□□□□ -1.3
NEDD4P46934 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
NEDD4P46934 OR8G3P-202ENST00000641572 1255 ntBASIC6.9□□□□□ -1.3
NEDD4P46934 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 AL731532.1-201ENST00000623972 4236 ntBASIC6.9□□□□□ -1.31
NEDD4P46934 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEDD4P46934 AL137918.1-201ENST00000624542 1922 ntBASIC6.9□□□□□ -1.31
NEDD4P46934 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.9□□□□□ -1.31
NEDD4P46934 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 AL669831.5-218ENST00000591702 1873 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 RN7SKP78-201ENST00000364711 318 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NEDD4P46934 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NEDD4P46934 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
NEDD4P46934 AL390879.1-201ENST00000439143 386 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.89□□□□□ -1.31
NEDD4P46934 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.89□□□□□ -1.31
NEDD4P46934 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.89□□□□□ -1.31
NEDD4P46934 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.89□□□□□ -1.31
NEDD4P46934 HNRNPCP1-201ENST00000556181 766 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 AC007346.2-201ENST00000564816 892 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.89□□□□□ -1.31
NEDD4P46934 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.89□□□□□ -1.31
NEDD4P46934 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 FAM27E4-201ENST00000605259 342 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NEDD4P46934 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
NEDD4P46934 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEDD4P46934 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.89□□□□□ -1.31
NEDD4P46934 MFSD8-239ENST00000641590 2479 ntBASIC6.89□□□□□ -1.31
NEDD4P46934 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms