Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 AC016583.1-201ENST00000624221 2431 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 RNU1-150P-201ENST00000362491 162 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL8A2P25067 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 RN7SKP151-201ENST00000410230 316 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 EEF1B2P8-201ENST00000414101 671 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 CDY17P-201ENST00000414121 1282 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 KIF4CP-201ENST00000422742 1279 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AL512637.1-201ENST00000439523 1231 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 RPL36AP39-201ENST00000445859 318 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.02□□□□□ -1.61
COL8A2P25067 ACA64.4-201ENST00000459070 127 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.02□□□□□ -1.61
COL8A2P25067 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 RPL17P2-201ENST00000491913 451 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 RN7SL57P-201ENST00000493687 290 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 CCDC11P1-201ENST00000503137 1162 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.02□□□□□ -1.61
COL8A2P25067 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.02□□□□□ -1.61
COL8A2P25067 RN7SKP248-201ENST00000516278 305 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.02□□□□□ -1.61
COL8A2P25067 AC135626.1-201ENST00000556983 435 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 ZNF322P1-201ENST00000568013 1209 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AC027334.1-201ENST00000603257 310 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 FAM27E4-201ENST00000605259 342 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AL137246.2-201ENST00000613439 662 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AL357153.4-201ENST00000620487 1016 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AC127024.6-201ENST00000621598 424 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 AC106872.5-201ENST00000508856 1416 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL8A2P25067 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
COL8A2P25067 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
COL8A2P25067 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 SHQ1P1-201ENST00000437111 1544 ntBASIC5.02□□□□□ -1.61
COL8A2P25067 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL8A2P25067 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.01□□□□□ -1.61
COL8A2P25067 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL8A2P25067 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 RN7SKP81-201ENST00000365603 331 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.01□□□□□ -1.61
COL8A2P25067 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.01□□□□□ -1.61
COL8A2P25067 RNA5SP284-201ENST00000384547 118 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AP003170.5-201ENST00000397185 335 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AL451046.1-201ENST00000406097 534 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 RPS17P17-201ENST00000419392 409 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.01□□□□□ -1.61
COL8A2P25067 AC126120.1-201ENST00000431082 470 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AL445928.1-201ENST00000435545 222 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AL391987.1-201ENST00000441025 200 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AC079922.1-201ENST00000443291 359 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.01□□□□□ -1.61
COL8A2P25067 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.01□□□□□ -1.61
COL8A2P25067 SDC4P-201ENST00000453285 601 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 OR2AF1P-201ENST00000454899 889 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AC104164.1-201ENST00000460282 590 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AC018638.3-201ENST00000461273 132 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.01□□□□□ -1.61
COL8A2P25067 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.01□□□□□ -1.61
COL8A2P25067 AC012146.2-201ENST00000576545 416 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 RN7SL753P-201ENST00000581238 290 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.01□□□□□ -1.61
COL8A2P25067 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 COX6CP7-201ENST00000597056 208 ntBASIC5.01□□□□□ -1.61
COL8A2P25067 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.01□□□□□ -1.61
COL8A2P25067 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL8A2P25067 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms