Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.97□□□□□ -0.81
TOP2AP11388 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC9.97□□□□□ -0.81
TOP2AP11388 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
TOP2AP11388 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.97□□□□□ -0.81
TOP2AP11388 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
TOP2AP11388 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 AC103591.2-201ENST00000265259 766 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.97□□□□□ -0.81
TOP2AP11388 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
TOP2AP11388 AL589647.1-201ENST00000402485 466 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 AC091685.2-201ENST00000454924 864 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 AC004453.1-201ENST00000487895 408 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 DUTP1-201ENST00000493631 470 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 AL121594.2-201ENST00000541658 472 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 MIR4301-201ENST00000577203 66 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 AP002505.2-201ENST00000623585 696 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC9.97□□□□□ -0.81
TOP2AP11388 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOP2AP11388 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOP2AP11388 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TOP2AP11388 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.96□□□□□ -0.82
TOP2AP11388 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TOP2AP11388 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TOP2AP11388 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
TOP2AP11388 MIR550A3-201ENST00000390735 95 ntBASIC9.96□□□□□ -0.82
TOP2AP11388 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.96□□□□□ -0.82
TOP2AP11388 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC9.96□□□□□ -0.82
TOP2AP11388 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TOP2AP11388 RN7SL51P-201ENST00000468230 285 ntBASIC9.96□□□□□ -0.82
TOP2AP11388 NDUFB5P1-201ENST00000508134 564 ntBASIC9.96□□□□□ -0.82
TOP2AP11388 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.96□□□□□ -0.82
TOP2AP11388 DPPA3P2-202ENST00000557188 1219 ntBASIC9.96□□□□□ -0.82
TOP2AP11388 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TOP2AP11388 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TOP2AP11388 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.96□□□□□ -0.82
TOP2AP11388 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
TOP2AP11388 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC9.96□□□□□ -0.82
TOP2AP11388 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.95□□□□□ -0.82
TOP2AP11388 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
TOP2AP11388 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 ABCA11P-202ENST00000504019 2110 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
TOP2AP11388 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 FABP5P2-201ENST00000439042 408 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 RPL7P39-201ENST00000481157 744 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
TOP2AP11388 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.95□□□□□ -0.82
TOP2AP11388 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.95□□□□□ -0.82
TOP2AP11388 MIR6748-201ENST00000610433 71 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 AL049539.1-201ENST00000611964 459 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
TOP2AP11388 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.95□□□□□ -0.82
TOP2AP11388 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.95□□□□□ -0.82
TOP2AP11388 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOP2AP11388 PABPC1P8-201ENST00000452851 2086 ntBASIC9.95□□□□□ -0.82
TOP2AP11388 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.95□□□□□ -0.82
TOP2AP11388 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
TOP2AP11388 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
TOP2AP11388 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOP2AP11388 CDC123-202ENST00000378900 933 ntTSL 5 BASIC9.94□□□□□ -0.82
TOP2AP11388 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC9.94□□□□□ -0.82
TOP2AP11388 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC9.94□□□□□ -0.82
TOP2AP11388 RPL7P61-201ENST00000451721 751 ntBASIC9.94□□□□□ -0.82
TOP2AP11388 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC9.94□□□□□ -0.82
TOP2AP11388 AL390726.5-202ENST00000564800 256 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms