Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 RNU5F-6P-201ENST00000362979 116 ntBASIC8.67□□□□□ -1.02
RNF40O75150 RNU6-1318P-201ENST00000365389 103 ntBASIC8.67□□□□□ -1.02
RNF40O75150 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 RNU6-31P-201ENST00000384388 108 ntBASIC8.67□□□□□ -1.02
RNF40O75150 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RNF40O75150 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 USP9YP13-201ENST00000417797 480 ntBASIC8.67□□□□□ -1.02
RNF40O75150 PPIAP25-201ENST00000420177 540 ntBASIC8.67□□□□□ -1.02
RNF40O75150 PTP4A1P1-201ENST00000420539 515 ntBASIC8.67□□□□□ -1.02
RNF40O75150 OR5P4P-201ENST00000424698 917 ntBASIC8.67□□□□□ -1.02
RNF40O75150 OR52B5P-201ENST00000435337 951 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 HSPD1P7-201ENST00000447985 1686 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AL135929.1-201ENST00000449287 552 ntBASIC8.67□□□□□ -1.02
RNF40O75150 SNRPGP6-201ENST00000451124 220 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AL033528.1-201ENST00000453780 140 ntBASIC8.67□□□□□ -1.02
RNF40O75150 FGF7P3-201ENST00000454645 303 ntBASIC8.67□□□□□ -1.02
RNF40O75150 SNRPFP4-201ENST00000456366 242 ntBASIC8.67□□□□□ -1.02
RNF40O75150 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 OR9A3P-202ENST00000485185 878 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AL031864.2-201ENST00000498507 350 ntBASIC8.67□□□□□ -1.02
RNF40O75150 HMGB1P29-201ENST00000505659 499 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.67□□□□□ -1.02
RNF40O75150 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC8.67□□□□□ -1.02
RNF40O75150 AC114786.1-201ENST00000512892 1415 ntBASIC8.67□□□□□ -1.02
RNF40O75150 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.67□□□□□ -1.02
RNF40O75150 AC008802.1-201ENST00000519121 791 ntBASIC8.67□□□□□ -1.02
RNF40O75150 ARL2BPP5-201ENST00000523141 481 ntBASIC8.67□□□□□ -1.02
RNF40O75150 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 AC018653.2-201ENST00000540190 238 ntBASIC8.67□□□□□ -1.02
RNF40O75150 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RNF40O75150 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.67□□□□□ -1.02
RNF40O75150 AC138915.3-201ENST00000562908 1389 ntBASIC8.67□□□□□ -1.02
RNF40O75150 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.67□□□□□ -1.02
RNF40O75150 MTCYBP13-201ENST00000578634 1093 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 AC005726.4-201ENST00000582858 458 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AC109315.1-201ENST00000584143 1347 ntBASIC8.67□□□□□ -1.02
RNF40O75150 SLC6A21P-201ENST00000599458 369 ntBASIC8.67□□□□□ -1.02
RNF40O75150 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AC006504.8-201ENST00000621046 635 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AL359396.1-201ENST00000623151 2376 ntBASIC8.67□□□□□ -1.02
RNF40O75150 AL136967.1-201ENST00000625120 441 ntBASIC8.67□□□□□ -1.02
RNF40O75150 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.67□□□□□ -1.02
RNF40O75150 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RNF40O75150 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.67□□□□□ -1.02
RNF40O75150 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 WASF5P-205ENST00000428639 1455 ntBASIC8.66□□□□□ -1.02
RNF40O75150 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
RNF40O75150 OR9K2-201ENST00000305377 1122 ntBASIC8.66□□□□□ -1.02
RNF40O75150 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RNF40O75150 Y_RNA.86-201ENST00000363020 111 ntBASIC8.66□□□□□ -1.02
RNF40O75150 Y_RNA.145-201ENST00000363527 102 ntBASIC8.66□□□□□ -1.02
RNF40O75150 Y_RNA.166-201ENST00000363730 102 ntBASIC8.66□□□□□ -1.02
RNF40O75150 RNA5SP27-201ENST00000363839 119 ntBASIC8.66□□□□□ -1.02
RNF40O75150 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.66□□□□□ -1.02
RNF40O75150 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RNF40O75150 RNU4-55P-201ENST00000410731 137 ntBASIC8.66□□□□□ -1.02
RNF40O75150 RN7SKP181-201ENST00000411188 316 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
RNF40O75150 AC092647.1-201ENST00000420654 287 ntBASIC8.66□□□□□ -1.02
RNF40O75150 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.66□□□□□ -1.02
RNF40O75150 AC097527.1-201ENST00000437031 530 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms