Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC116036.1-201ENST00000412199 367 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 RN7SL570P-201ENST00000484405 292 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 OR51A1P-201ENST00000511110 946 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 OR8G3P-201ENST00000533406 921 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC126615.2-201ENST00000553003 515 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC137695.1-201ENST00000604126 489 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC008115.4-201ENST00000619780 775 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC006511.3-201ENST00000624929 1783 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 GTF2IP4-201ENST00000453092 2054 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MRE11P1-201ENST00000464884 2127 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AL590762.4-201ENST00000425885 253 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AL450023.1-201ENST00000450868 751 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ACA64.4-201ENST00000459070 127 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 FKBP1AP1-201ENST00000594588 318 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AC104785.1-201ENST00000603220 588 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AP000550.3-201ENST00000637734 379 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.68□□□□□ -1.02
SHANK2Q9UPX8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 RN7SKP273-201ENST00000411392 314 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL807761.1-201ENST00000417622 171 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AC005297.1-201ENST00000444765 862 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL603882.1-201ENST00000463059 681 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 SCARNA6.1-201ENST00000516989 238 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL049872.1-201ENST00000556323 322 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AC096996.1-201ENST00000563813 325 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 RN7SL708P-201ENST00000580952 299 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL049539.1-201ENST00000611964 459 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 MIR8080-201ENST00000622224 89 ntBASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AC079753.1-201ENST00000623243 3868 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms