Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AP006248.1-201ENST00000610471 67 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC010542.5-201ENST00000612427 382 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MIR6893-201ENST00000613458 69 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC008250.2-201ENST00000615261 205 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CNTNAP3P1-201ENST00000616657 906 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC104010.1-201ENST00000616889 150 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MIR6831-201ENST00000617240 81 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC106782.7-201ENST00000624024 418 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC133555.5-201ENST00000624430 418 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC005618.4-201ENST00000625053 554 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC093495.1-214ENST00000627116 559 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CDRT1-208ENST00000630868 794 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC105749.1-201ENST00000631338 2008 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC063952.1-203ENST00000634410 658 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 TEX51-209ENST00000636457 811 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 XRCC6P2-201ENST00000457831 1822 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AP000766.1-201ENST00000561746 4140 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MAPK10-270ENST00000641102 3538 ntBASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PTER-203ENST00000423462 3212 ntTSL 3 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LCE3DQ9BYE3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MAPK10-313ENST00000641405 2469 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 PARP1P1-201ENST00000413631 3026 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms