Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC011155.1-201ENST00000316512 456 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 RNA5SP188-201ENST00000362916 129 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 Y_RNA.202-201ENST00000364083 110 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 RN7SKP187-201ENST00000365536 330 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 RNA5SP122-201ENST00000384457 108 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 MIR191-201ENST00000384873 92 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC121334.1-201ENST00000396414 802 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 Y_RNA.605-201ENST00000410577 105 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 RNU2-39P-201ENST00000410604 198 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AL358176.2-201ENST00000425769 204 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC099344.1-201ENST00000433548 492 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC024082.2-201ENST00000434771 238 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 RPL12P49-201ENST00000441100 121 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 HSPE1P28-201ENST00000443139 211 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 ARPC3P2-201ENST00000457786 533 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 SNORA35.1-201ENST00000458908 128 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AL928654.1-201ENST00000476081 354 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 RNA5SP473-201ENST00000516402 125 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC008802.1-201ENST00000519121 791 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AL512310.1-201ENST00000548639 172 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 HIF1AP1-201ENST00000553642 175 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC009027.1-201ENST00000604510 479 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC093788.1-201ENST00000609356 927 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC015819.1-201ENST00000613588 663 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AC073055.1-201ENST00000456901 1621 ntBASIC8.68□□□□□ -1.02
LRCH3Q96II8 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LRCH3Q96II8 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.68□□□□□ -1.02
LRCH3Q96II8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 ABCA17P-204ENST00000494925 3478 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 SNORD15A-201ENST00000384214 148 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL356361.1-201ENST00000400943 1459 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL122016.1-201ENST00000403365 367 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC012078.1-201ENST00000405035 1646 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL354719.1-201ENST00000406535 843 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL139805.1-201ENST00000407837 289 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AF121897.1-201ENST00000411867 3980 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL389915.1-201ENST00000422463 466 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL157884.1-201ENST00000424561 454 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 RPL14P5-201ENST00000436474 730 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms