Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RN7SL643P-201ENST00000471845 291 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC134698.1-201ENST00000511619 643 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 OR9G2P-201ENST00000533326 880 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 MRPL45P2-203ENST00000573318 473 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AP002884.5-201ENST00000595053 1132 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 DYNLL1P1-201ENST00000595442 269 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC022387.2-201ENST00000604050 448 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AC015922.4-201ENST00000612568 690 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 AL133243.2-201ENST00000610331 1621 ntBASIC5.88□□□□□ -1.47
VPS33AQ96AX1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS33AQ96AX1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC016745.2-201ENST00000608834 3443 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC107021.2-201ENST00000567714 2095 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 MIR27A-201ENST00000385073 78 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL607077.1-201ENST00000401718 499 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL117344.1-201ENST00000407196 616 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RNA5SP155-201ENST00000411154 129 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RNU2-22P-201ENST00000411266 212 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC092646.1-201ENST00000427142 901 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 GAPDHP23-201ENST00000444823 993 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RPL5P10-201ENST00000445207 894 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RSL24D1P2-201ENST00000445584 366 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SLAMF6P1-201ENST00000451067 602 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RAB28P2-201ENST00000454299 641 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RN7SL413P-201ENST00000482700 297 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SNORA70.11-201ENST00000515987 138 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SNORA70.13-201ENST00000516116 138 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SEC11B-201ENST00000518383 499 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 TPM3P3-201ENST00000521343 354 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC078878.1-201ENST00000539832 958 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC023080.1-201ENST00000551663 931 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 NPM1P42-201ENST00000560329 862 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 OR7E19P-202ENST00000589942 844 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC245128.3-201ENST00000594721 748 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RPL7AP69-201ENST00000595306 806 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL512430.4-201ENST00000603085 613 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL592494.3-201ENST00000609485 464 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 KYNUP3-201ENST00000574386 1341 ntBASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS33AQ96AX1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms