Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.64□□□□□ -1.19
HPS1Q92902 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
HPS1Q92902 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
HPS1Q92902 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HPS1Q92902 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.64□□□□□ -1.19
HPS1Q92902 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC7.64□□□□□ -1.19
HPS1Q92902 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HPS1Q92902 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
HPS1Q92902 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HPS1Q92902 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HPS1Q92902 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HPS1Q92902 AC027279.1-201ENST00000568885 4284 ntBASIC7.64□□□□□ -1.19
HPS1Q92902 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 GUCY2GP-201ENST00000479705 3222 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 LYARP1-201ENST00000436977 1501 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 HCG18-244ENST00000602516 2890 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 CTBP2P2-201ENST00000434549 1334 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 RNU6-451P-201ENST00000362921 107 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
HPS1Q92902 U3.17-201ENST00000390863 203 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 SNORD65.1-201ENST00000390889 71 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 TXNP7-201ENST00000406296 293 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 HMGB3P18-201ENST00000406327 590 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 MIR548I3-201ENST00000408378 149 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 MIR548I1-201ENST00000408810 149 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RN7SKP29-201ENST00000410957 272 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.63□□□□□ -1.19
HPS1Q92902 AL139128.1-201ENST00000413921 941 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RPL7AP72-201ENST00000417266 768 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 MTCYBP8-201ENST00000422855 651 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RPL35AP12-201ENST00000425362 338 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC002069.1-201ENST00000429649 1159 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 FCF1P1-201ENST00000432690 571 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 RPL7L1P11-201ENST00000446092 721 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RPL7P12-201ENST00000446719 750 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 AL450023.2-201ENST00000453276 545 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 RPL10AP3-201ENST00000462503 651 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RN7SL35P-201ENST00000466169 292 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 RPL12P5-201ENST00000475149 392 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC010655.3-201ENST00000478818 450 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RPL23AP37-201ENST00000479658 549 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 IGKV1-27-201ENST00000498435 382 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
HPS1Q92902 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.63□□□□□ -1.19
HPS1Q92902 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC034159.1-201ENST00000513885 583 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RNU6-1225P-201ENST00000516336 65 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RNU6-1271P-201ENST00000517049 105 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AP002802.1-201ENST00000526154 342 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.63□□□□□ -1.19
HPS1Q92902 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 POLR3GP2-201ENST00000588366 668 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 AL022345.3-201ENST00000611406 228 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RFPL4AP6-201ENST00000616792 846 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 U4.1-201ENST00000620349 87 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 AL355987.5-201ENST00000621585 411 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 MIR3160-2-201ENST00000637870 81 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 ABBA01040607.1-201ENST00000640749 321 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms