Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC027559.1-201ENST00000636288 271 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC090897.3-201ENST00000636973 1157 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 DDX43P1-201ENST00000510713 1763 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC008957.3-201ENST00000624112 2242 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 Z93929.1-201ENST00000418200 1475 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 Y_RNA.436-201ENST00000384097 102 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 RNU6-636P-201ENST00000384598 107 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL353133.1-201ENST00000407695 401 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 RNA5SP155-201ENST00000411154 129 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AC008173.1-201ENST00000418901 264 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AC008753.1-201ENST00000423096 284 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 DUTP4-201ENST00000424782 475 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL590128.1-201ENST00000433407 286 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AC073476.1-201ENST00000452854 407 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 MEF2AP1-201ENST00000454867 863 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 RPS7P11-201ENST00000484240 586 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 PABPC1P1-201ENST00000506347 591 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SNORA3.4-201ENST00000515969 96 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SNRPCP6-201ENST00000528310 210 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 OR4C49P-201ENST00000563891 900 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AC109446.2-201ENST00000567872 497 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL390877.1-201ENST00000605704 214 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 ZNF90P1-201ENST00000480493 1951 ntBASIC6.65□□□□□ -1.34
TRIM48Q8IWZ4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 RBPJP6-201ENST00000411556 1431 ntBASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM48Q8IWZ4 AL359195.2-201ENST00000623657 4412 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 ENO1P4-201ENST00000416471 1785 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 ZNF806-201ENST00000438300 1774 ntBASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM48Q8IWZ4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms