Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC138517.1-201ENST00000515724 568 ntBASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 NTS-203ENST00000551529 801 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AL161729.2-201ENST00000605700 456 ntBASIC8.1□□□□□ -1.11
RNF135Q8IUD6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC003985.2-201ENST00000562268 1669 ntBASIC8.1□□□□□ -1.11
RNF135Q8IUD6 OR2A20P-201ENST00000479887 2913 ntBASIC8.1□□□□□ -1.11
RNF135Q8IUD6 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 AC087203.2-201ENST00000526502 1587 ntBASIC8.1□□□□□ -1.11
RNF135Q8IUD6 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RNF135Q8IUD6 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 SMG1P1-202ENST00000309865 4223 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 OR9K2-201ENST00000305377 1122 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AL451061.1-201ENST00000407887 862 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 Z98752.2-201ENST00000432727 312 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 GCNT1P5-201ENST00000449274 682 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC092001.1-201ENST00000453012 261 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 PSAT1P4-201ENST00000466500 526 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 RN7SL36P-201ENST00000469345 276 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC025271.1-201ENST00000485045 429 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC079382.1-201ENST00000493346 557 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 RPL7L1P7-201ENST00000509986 724 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC092709.1-201ENST00000521355 1045 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 UBE2CP4-201ENST00000561405 535 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC009063.1-201ENST00000563342 702 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC138207.8-204ENST00000579588 527 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AP005262.1-201ENST00000582646 997 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC008945.2-201ENST00000606056 604 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 7SK.12-201ENST00000612820 244 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AC004009.2-201ENST00000623016 728 ntBASIC8.09□□□□□ -1.11
RNF135Q8IUD6 AL359697.1-201ENST00000624879 587 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms