Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RBMY2DP-202ENST00000448881 1157 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC068491.1-201ENST00000449539 1241 ntBASIC6.17□□□□□ -1.42
CDH6P55285 RBMY2BP-202ENST00000451071 1156 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC104339.1-201ENST00000465478 348 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC092865.4-201ENST00000477936 615 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH6P55285 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
CDH6P55285 SUMO2P19-201ENST00000518920 295 ntBASIC6.17□□□□□ -1.42
CDH6P55285 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH6P55285 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH6P55285 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.17□□□□□ -1.42
CDH6P55285 AC007346.2-201ENST00000564816 892 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH6P55285 AC002310.3-201ENST00000569728 723 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.17□□□□□ -1.42
CDH6P55285 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH6P55285 AP001267.4-201ENST00000602598 545 ntBASIC6.17□□□□□ -1.42
CDH6P55285 MIR6780B-201ENST00000610307 79 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AL021918.2-201ENST00000613415 194 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CDH6P55285 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 AC007159.1-201ENST00000566529 4706 ntBASIC6.17□□□□□ -1.42
CDH6P55285 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 AC012254.3-201ENST00000591183 2117 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AC239868.2-201ENST00000564237 4527 ntBASIC6.17□□□□□ -1.42
CDH6P55285 AL354854.1-201ENST00000455940 1363 ntBASIC6.17□□□□□ -1.42
CDH6P55285 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH6P55285 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 RNU1-65P-201ENST00000363919 148 ntBASIC6.16□□□□□ -1.42
CDH6P55285 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH6P55285 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDH6P55285 MIR130B-202ENST00000385018 82 ntBASIC6.16□□□□□ -1.42
CDH6P55285 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH6P55285 AL445928.1-201ENST00000435545 222 ntBASIC6.16□□□□□ -1.42
CDH6P55285 PNKDP1-201ENST00000435914 430 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.16□□□□□ -1.42
CDH6P55285 OSTCP1-201ENST00000455507 450 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC098847.1-201ENST00000473094 348 ntBASIC6.16□□□□□ -1.42
CDH6P55285 RPL38P3-201ENST00000484463 213 ntBASIC6.16□□□□□ -1.42
CDH6P55285 RN7SL649P-201ENST00000496974 275 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH6P55285 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.16□□□□□ -1.42
CDH6P55285 snoU109.5-201ENST00000516231 132 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH6P55285 OR4A42P-201ENST00000531397 938 ntBASIC6.16□□□□□ -1.42
CDH6P55285 NPM1P42-201ENST00000560329 862 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AP005119.1-201ENST00000580956 292 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH6P55285 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.16□□□□□ -1.42
CDH6P55285 AP001437.1-201ENST00000608783 456 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 MIR7109-201ENST00000613748 65 ntBASIC6.16□□□□□ -1.42
CDH6P55285 AC096708.4-201ENST00000620563 552 ntBASIC6.16□□□□□ -1.42
CDH6P55285 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CDH6P55285 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDH6P55285 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 AL049634.1-201ENST00000453770 1720 ntBASIC6.16□□□□□ -1.42
CDH6P55285 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDH6P55285 AC104966.1-201ENST00000467010 1464 ntBASIC6.15□□□□□ -1.42
CDH6P55285 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH6P55285 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH6P55285 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH6P55285 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH6P55285 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH6P55285 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH6P55285 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH6P55285 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH6P55285 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 RPL35AP3-201ENST00000414680 288 ntBASIC6.15□□□□□ -1.42
CDH6P55285 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 AC019084.1-201ENST00000457337 432 ntBASIC6.15□□□□□ -1.42
CDH6P55285 CTSLP6-201ENST00000458273 1002 ntBASIC6.15□□□□□ -1.42
CDH6P55285 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH6P55285 RN7SL269P-201ENST00000467795 305 ntBASIC6.15□□□□□ -1.42
CDH6P55285 AC023245.1-201ENST00000468501 517 ntBASIC6.15□□□□□ -1.42
CDH6P55285 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.15□□□□□ -1.42
CDH6P55285 IGKV3D-25-201ENST00000519599 235 ntBASIC6.15□□□□□ -1.42
CDH6P55285 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH6P55285 AC090424.1-201ENST00000535243 736 ntBASIC6.15□□□□□ -1.42
CDH6P55285 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH6P55285 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH6P55285 AC092266.1-201ENST00000610958 165 ntBASIC6.15□□□□□ -1.42
CDH6P55285 AL449283.1-201ENST00000602631 3403 ntBASIC6.15□□□□□ -1.42
CDH6P55285 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH6P55285 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms