Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 SAMMSON-210ENST00000641260 1308 ntBASIC6.56□□□□□ -1.36
COPAP53621 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPAP53621 RPL7P58-201ENST00000402913 758 ntBASIC6.56□□□□□ -1.36
COPAP53621 AMZ2P2-201ENST00000406819 1057 ntBASIC6.56□□□□□ -1.36
COPAP53621 RN7SKP240-201ENST00000410583 375 ntBASIC6.56□□□□□ -1.36
COPAP53621 DHFRP2-201ENST00000414224 547 ntBASIC6.56□□□□□ -1.36
COPAP53621 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 MTND2P15-201ENST00000418575 892 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC007568.1-201ENST00000422912 471 ntBASIC6.56□□□□□ -1.36
COPAP53621 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 AC079807.1-201ENST00000429993 481 ntBASIC6.56□□□□□ -1.36
COPAP53621 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 GTF2IP14-201ENST00000441415 586 ntBASIC6.56□□□□□ -1.36
COPAP53621 TXNP2-201ENST00000443918 295 ntBASIC6.56□□□□□ -1.36
COPAP53621 RPL12P24-201ENST00000474907 486 ntBASIC6.56□□□□□ -1.36
COPAP53621 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 AC131392.1-201ENST00000506490 633 ntBASIC6.56□□□□□ -1.36
COPAP53621 IGHV3-57-201ENST00000520143 280 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.56□□□□□ -1.36
COPAP53621 AC134349.2-201ENST00000535136 910 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC090115.2-201ENST00000548060 883 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC023968.1-201ENST00000560719 475 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 AC124916.2-201ENST00000604416 224 ntBASIC6.56□□□□□ -1.36
COPAP53621 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.56□□□□□ -1.36
COPAP53621 MIR6085-201ENST00000618314 110 ntBASIC6.56□□□□□ -1.36
COPAP53621 AC074276.2-201ENST00000619891 348 ntBASIC6.56□□□□□ -1.36
COPAP53621 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.56□□□□□ -1.36
COPAP53621 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.56□□□□□ -1.36
COPAP53621 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.56□□□□□ -1.36
COPAP53621 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COPAP53621 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COPAP53621 AP003486.1-201ENST00000525716 3994 ntBASIC6.56□□□□□ -1.36
COPAP53621 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.56□□□□□ -1.36
COPAP53621 AKAP17BP-201ENST00000431706 2719 ntBASIC6.56□□□□□ -1.36
COPAP53621 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.55□□□□□ -1.36
COPAP53621 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 FUNDC2P3-201ENST00000334716 533 ntBASIC6.55□□□□□ -1.36
COPAP53621 CCNB2P1-201ENST00000399411 1150 ntBASIC6.55□□□□□ -1.36
COPAP53621 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 AL139415.1-201ENST00000424862 352 ntBASIC6.55□□□□□ -1.36
COPAP53621 MED28P4-201ENST00000433137 572 ntBASIC6.55□□□□□ -1.36
COPAP53621 HMGN1P2-201ENST00000445197 310 ntBASIC6.55□□□□□ -1.36
COPAP53621 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.55□□□□□ -1.36
COPAP53621 MTND6P5-201ENST00000448266 512 ntBASIC6.55□□□□□ -1.36
COPAP53621 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.55□□□□□ -1.36
COPAP53621 RPL23AP64-201ENST00000469465 435 ntBASIC6.55□□□□□ -1.36
COPAP53621 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 SUMO2P19-201ENST00000518920 295 ntBASIC6.55□□□□□ -1.36
COPAP53621 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.55□□□□□ -1.36
COPAP53621 OR4V1P-201ENST00000525394 1140 ntBASIC6.55□□□□□ -1.36
COPAP53621 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 AC002519.2-203ENST00000567043 837 ntBASIC6.55□□□□□ -1.36
COPAP53621 NDUFA5P11-201ENST00000567995 343 ntBASIC6.55□□□□□ -1.36
COPAP53621 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.55□□□□□ -1.36
COPAP53621 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.55□□□□□ -1.36
COPAP53621 GLYATL1P2-202ENST00000588046 902 ntBASIC6.55□□□□□ -1.36
COPAP53621 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 AC084824.5-201ENST00000612009 413 ntBASIC6.55□□□□□ -1.36
COPAP53621 AC005393.1-201ENST00000617916 584 ntBASIC6.55□□□□□ -1.36
COPAP53621 MIR6861-201ENST00000618657 64 ntBASIC6.55□□□□□ -1.36
COPAP53621 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.55□□□□□ -1.36
COPAP53621 AC106858.1-201ENST00000637497 429 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms