Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 AC008555.7-201ENST00000605008 583 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 MIR6729-201ENST00000618194 65 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AC096708.4-201ENST00000620563 552 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AC026124.2-201ENST00000621847 656 ntBASIC5.6□□□□□ -1.51
RFC3P40938 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 AC025470.1-201ENST00000510053 2032 ntBASIC5.6□□□□□ -1.51
RFC3P40938 AC011815.2-201ENST00000618230 2021 ntBASIC5.6□□□□□ -1.51
RFC3P40938 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC3P40938 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC3P40938 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC3P40938 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFC3P40938 RBMY1HP-201ENST00000382759 1389 ntBASIC5.59□□□□□ -1.51
RFC3P40938 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 RNFT1P3-201ENST00000340898 1052 ntBASIC5.59□□□□□ -1.51
RFC3P40938 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 MIR323B-201ENST00000385269 82 ntBASIC5.59□□□□□ -1.51
RFC3P40938 RPL35AP31-201ENST00000418340 337 ntBASIC5.59□□□□□ -1.51
RFC3P40938 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 AC007568.1-201ENST00000422912 471 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AC097721.1-201ENST00000427150 1253 ntBASIC5.59□□□□□ -1.51
RFC3P40938 CDY8P-201ENST00000428380 1279 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 AC073109.1-201ENST00000445066 978 ntBASIC5.59□□□□□ -1.51
RFC3P40938 CDY20P-201ENST00000447528 1279 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AC084754.1-201ENST00000463466 464 ntBASIC5.59□□□□□ -1.51
RFC3P40938 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 AC104109.1-201ENST00000498563 436 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 Y_RNA.667-201ENST00000516212 107 ntBASIC5.59□□□□□ -1.51
RFC3P40938 RNA5SP438-201ENST00000516561 112 ntBASIC5.59□□□□□ -1.51
RFC3P40938 RNA5SP400-201ENST00000517155 111 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AC060775.1-201ENST00000518241 520 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.59□□□□□ -1.51
RFC3P40938 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 AP003396.4-201ENST00000527574 265 ntBASIC5.59□□□□□ -1.51
RFC3P40938 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.59□□□□□ -1.51
RFC3P40938 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC3P40938 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 AC007956.1-201ENST00000555623 542 ntBASIC5.59□□□□□ -1.51
RFC3P40938 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 RNU4ATAC-201ENST00000580972 127 ntBASIC5.59□□□□□ -1.51
RFC3P40938 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC3P40938 AC129915.3-201ENST00000634128 948 ntBASIC5.59□□□□□ -1.51
RFC3P40938 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFC3P40938 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC3P40938 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC3P40938 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFC3P40938 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.59□□□□□ -1.52
RFC3P40938 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RFC3P40938 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RFC3P40938 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFC3P40938 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC3P40938 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AL355834.1-201ENST00000556602 3965 ntBASIC5.58□□□□□ -1.52
RFC3P40938 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 AC011416.1-201ENST00000514947 1732 ntBASIC5.58□□□□□ -1.52
RFC3P40938 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.58□□□□□ -1.52
RFC3P40938 RNA5SP350-201ENST00000363298 111 ntBASIC5.58□□□□□ -1.52
RFC3P40938 RNU1-59P-201ENST00000364829 162 ntBASIC5.58□□□□□ -1.52
RFC3P40938 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC3P40938 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms