Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SCN4AP35499 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SCN4AP35499 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.98□□□□□ -1.29
SCN4AP35499 AC108075.1-201ENST00000424692 529 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 AL663074.2-201ENST00000440621 479 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 DNAJB5P1-201ENST00000454004 806 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 CEACAMP10-202ENST00000495431 496 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.98□□□□□ -1.29
SCN4AP35499 SCARNA6.1-201ENST00000516989 238 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN4AP35499 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN4AP35499 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.98□□□□□ -1.29
SCN4AP35499 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.98□□□□□ -1.29
SCN4AP35499 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN4AP35499 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN4AP35499 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN4AP35499 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN4AP35499 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.98□□□□□ -1.29
SCN4AP35499 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 AC022893.2-201ENST00000564832 3296 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SCN4AP35499 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 RPS26P13-201ENST00000419030 330 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 RAB28P2-201ENST00000454299 641 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 RPS29P22-201ENST00000472363 168 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC073610.1-201ENST00000489971 396 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 FTH1P8-201ENST00000498161 514 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC074050.1-201ENST00000563247 211 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 HSPA8P18-201ENST00000439846 1928 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.97□□□□□ -1.29
SCN4AP35499 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 MIR765-201ENST00000390226 114 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 AC099521.1-201ENST00000482557 334 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 OR7E158P-201ENST00000524483 910 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.97□□□□□ -1.29
SCN4AP35499 AF230666.2-201ENST00000602328 725 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AC105105.5-201ENST00000622635 1294 ntBASIC6.97□□□□□ -1.29
SCN4AP35499 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SCN4AP35499 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.97□□□□□ -1.29
SCN4AP35499 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SCN4AP35499 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
SCN4AP35499 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCN4AP35499 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCN4AP35499 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.96□□□□□ -1.29
SCN4AP35499 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCN4AP35499 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.96□□□□□ -1.29
SCN4AP35499 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCN4AP35499 AL161912.4-201ENST00000623889 2468 ntBASIC6.96□□□□□ -1.3
SCN4AP35499 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
SCN4AP35499 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCN4AP35499 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms