Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.69□□□□□ -1.34
COL6A2P12110 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.69□□□□□ -1.34
COL6A2P12110 AC091193.1-201ENST00000604640 448 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AC097467.4-201ENST00000605504 141 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AL139407.1-201ENST00000613826 1175 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AC090116.1-201ENST00000615679 446 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AC026108.1-201ENST00000635444 547 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
COL6A2P12110 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 API5P1-201ENST00000424316 1510 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 UGT2B24P-201ENST00000514441 1597 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 BX284613.1-201ENST00000452221 1641 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 RACGAP1P-201ENST00000550663 1879 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 TNPO1P2-201ENST00000426249 2665 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL6A2P12110 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 FAM32BP-201ENST00000344033 333 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 RNU6-236P-201ENST00000363886 106 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 RNU12-2P-201ENST00000364789 156 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 AL445238.1-204ENST00000400311 463 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 RPL23AP80-201ENST00000495605 424 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC097460.2-201ENST00000511857 741 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC079064.1-201ENST00000528365 362 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 LRRC6P1-201ENST00000532188 885 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
COL6A2P12110 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 FRG2MP-201ENST00000613317 856 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 AC004241.2-201ENST00000614562 444 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 AC018558.4-201ENST00000622153 281 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 SNORA16A-202ENST00000628458 135 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC007159.1-201ENST00000566529 4706 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 TUBBP10-201ENST00000427668 1301 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.68□□□□□ -1.34
COL6A2P12110 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL6A2P12110 AC100810.3-201ENST00000633189 2240 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 CDY11P-201ENST00000447168 1651 ntBASIC6.68□□□□□ -1.34
COL6A2P12110 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.68□□□□□ -1.34
COL6A2P12110 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL6A2P12110 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms