Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 AL049634.1-201ENST00000453770 1720 ntBASIC5.49□□□□□ -1.53
SPTA1P02549 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.49□□□□□ -1.53
SPTA1P02549 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.49□□□□□ -1.53
SPTA1P02549 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SPTA1P02549 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SPTA1P02549 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SPTA1P02549 MIR765-201ENST00000390226 114 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.48□□□□□ -1.53
SPTA1P02549 CDK7P1-201ENST00000434574 693 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 CEACAMP9-201ENST00000442990 513 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 RN7SL547P-201ENST00000490793 290 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 SNORA70.20-201ENST00000516848 126 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.48□□□□□ -1.53
SPTA1P02549 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 AP001858.2-201ENST00000536213 601 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 BNIP3P22-201ENST00000593399 556 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 AL645933.2-201ENST00000606743 1207 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.48□□□□□ -1.53
SPTA1P02549 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.48□□□□□ -1.53
SPTA1P02549 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SPTA1P02549 RNA5SP234-201ENST00000363916 119 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SPTA1P02549 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.48□□□□□ -1.53
SPTA1P02549 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.48□□□□□ -1.53
SPTA1P02549 RNU6-615P-201ENST00000516065 106 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.48□□□□□ -1.53
SPTA1P02549 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.48□□□□□ -1.53
SPTA1P02549 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SPTA1P02549 AL121835.2-201ENST00000624253 3502 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.48□□□□□ -1.53
SPTA1P02549 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC5.48□□□□□ -1.53
SPTA1P02549 HDAC1P2-201ENST00000453661 1398 ntBASIC5.48□□□□□ -1.53
SPTA1P02549 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SPTA1P02549 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SPTA1P02549 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 U8.4-201ENST00000363626 134 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 RPL7L1P11-201ENST00000446092 721 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 Y_RNA.710-201ENST00000516975 110 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 FKBP1AP1-201ENST00000594588 318 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 FAM25E-202ENST00000608562 189 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AC096861.1-201ENST00000616652 240 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 MIR7641-1-201ENST00000627518 61 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 AC092111.1-201ENST00000618256 3358 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms