Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC66A2RUB6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC66A2RUB6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC66A2RUB6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.09□□□□□ -1.28
CCDC66A2RUB6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL512353.3-201ENST00000417517 1326 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 QRSL1P3-201ENST00000552666 1316 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC023886.2-201ENST00000321285 411 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RNU12-2P-201ENST00000364789 156 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL355615.1-201ENST00000406187 641 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RN7SKP117-201ENST00000410175 264 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RNA5SP115-201ENST00000411160 107 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RNA5SP280-201ENST00000411230 115 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC096533.1-201ENST00000411645 353 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RAB9AP4-201ENST00000415230 609 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 HIGD1AP15-201ENST00000416198 280 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL354868.1-201ENST00000417077 482 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC241520.1-201ENST00000422654 1099 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL138479.1-201ENST00000426913 484 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 MTCO1P51-201ENST00000427672 1060 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC245517.2-201ENST00000442890 346 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RN7SL552P-201ENST00000462094 276 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC008379.1-201ENST00000463655 464 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC104629.2-201ENST00000468627 598 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 TUBBP11-201ENST00000472255 252 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 SUMO2P5-201ENST00000506790 245 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC010476.1-201ENST00000519111 851 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 IGHV3-57-201ENST00000520143 280 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 RNA5SP439-201ENST00000617595 124 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC078880.5-201ENST00000617845 421 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AC005393.1-201ENST00000617916 584 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 AL512427.1-201ENST00000618593 349 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 FRG1DP-201ENST00000635586 771 ntBASIC7.08□□□□□ -1.28
CCDC66A2RUB6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC66A2RUB6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 NEK2P2-201ENST00000438441 1338 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AC092451.3-201ENST00000625067 1343 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 CR788268.1-201ENST00000603931 1809 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 ZNF29P-201ENST00000225587 168 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 RNA5SP188-201ENST00000362916 129 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AL117344.1-201ENST00000407196 616 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 RN7SKP30-201ENST00000411373 334 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 VN1R31P-201ENST00000417498 730 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 XKRYP1-201ENST00000423438 492 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 SETP9-201ENST00000423837 832 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 VTI1BP4-201ENST00000427516 527 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 XKRYP2-201ENST00000432915 492 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AC239800.1-201ENST00000442049 719 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 EXOSC3P1-201ENST00000448649 500 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC66A2RUB6 Z83838.1-202ENST00000456225 839 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 MED28P7-201ENST00000456611 530 ntBASIC7.07□□□□□ -1.28
CCDC66A2RUB6 RPSAP24-201ENST00000461543 873 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms