Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AC011416.1-201ENST00000514947 1732 ntBASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DRB4X5D2U9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC121334.1-201ENST00000396414 802 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 RNA5SP156-201ENST00000410250 110 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC073594.1-201ENST00000462065 364 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC098818.1-201ENST00000478593 252 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 RPL34P33-201ENST00000486062 334 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AP002453.1-201ENST00000492327 668 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SL362P-201ENST00000494228 267 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ST13P12-201ENST00000508958 1094 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL078601.3-201ENST00000573303 535 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 TXNP4-201ENST00000575018 310 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AP005136.2-201ENST00000583253 1049 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC027334.1-201ENST00000603257 310 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AL135999.3-201ENST00000610501 812 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC022106.1-201ENST00000612834 766 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC125336.1-201ENST00000508893 2827 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 AC016745.2-201ENST00000608834 3443 ntBASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DRB4X5D2U9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC022325.1-201ENST00000502748 2199 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC004158.1-201ENST00000564508 4319 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AL359955.1-201ENST00000455242 3275 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 SNORA5.1-201ENST00000384275 131 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AL359885.1-201ENST00000415786 903 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC017078.1-201ENST00000416146 368 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 DPPA2P2-201ENST00000418220 897 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 THEM7P-201ENST00000419556 672 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 REREP1Y-201ENST00000422655 198 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AL139158.1-201ENST00000424719 340 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC092865.3-201ENST00000425390 1026 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 PSMD10P2-201ENST00000432890 672 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 SUMO2P8-201ENST00000434672 286 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC096632.2-201ENST00000438139 1239 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 REREP2Y-201ENST00000439103 200 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AL590004.3-202ENST00000445883 451 ntBASIC4.55□□□□□ -1.68
HLA-DRB4X5D2U9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms