Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC074141.1-201ENST00000588129 2995 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC010329.1-201ENST00000593903 8328 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC103591.2-201ENST00000265259 766 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 SNORA21-201ENST00000362423 132 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 RNU4-39P-201ENST00000362455 127 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 RNU6-152P-201ENST00000384037 107 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 RN7SKP62-201ENST00000384539 329 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 FMO7P-201ENST00000436045 768 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 HMGN1P6-201ENST00000438508 291 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL450996.1-201ENST00000445574 1202 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC108161.1-201ENST00000461060 402 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL133445.1-201ENST00000467051 452 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC108693.1-201ENST00000496068 432 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 MTND6P8-201ENST00000503471 522 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC093763.2-201ENST00000505334 1223 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 DUTP7-201ENST00000507982 486 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 PRELID3BP3-201ENST00000584963 545 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 FAM60CP-201ENST00000591086 664 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 OR7M1P-201ENST00000608946 533 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AL391834.2-201ENST00000609982 546 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC005277.2-201ENST00000617898 390 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC018692.2-201ENST00000624130 348 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC027279.4-201ENST00000624371 2072 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 AC125238.2-201ENST00000430003 1440 ntBASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.61□□□□□ -1.19
SMC1BQ8NDV3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RNU1-150P-201ENST00000362491 162 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RN7SKP103-201ENST00000363848 320 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 SNORA27.3-201ENST00000364937 134 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 SNORA72.3-201ENST00000365074 132 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AL096711.1-201ENST00000404780 554 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RN7SKP279-201ENST00000411383 298 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RPL34P3-201ENST00000421454 338 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MRPS33P4-201ENST00000434892 317 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 VN1R110P-201ENST00000438988 971 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC073072.2-201ENST00000447425 348 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC135721.2-201ENST00000464237 300 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RPL34P33-201ENST00000486062 334 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 OR9N1P-201ENST00000491296 333 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 CR383658.1-201ENST00000514609 734 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MTND5P21-201ENST00000531961 522 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC013283.1-201ENST00000557282 492 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AC010872.1-201ENST00000624225 675 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms