Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL731566.2-201ENST00000618971 317 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 THAP12P9-201ENST00000503971 2360 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC026951.1-201ENST00000559530 2459 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC005042.1-201ENST00000393397 800 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC116036.1-201ENST00000412199 367 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 GABARAPL3-201ENST00000412799 354 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AL357752.1-201ENST00000412817 349 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC023818.1-201ENST00000498379 384 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 CR383656.6-201ENST00000550518 394 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 MIR6837-201ENST00000620884 64 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC114876.1-201ENST00000490962 1366 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 API5-210ENST00000534600 1760 ntTSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 RNA5-8SP5-201ENST00000365304 152 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 MIR223-201ENST00000385204 110 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 RPL32P33-201ENST00000487023 394 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 RPS21P4-201ENST00000487122 248 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AC004453.1-201ENST00000487895 408 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AC145423.1-201ENST00000605712 336 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AL031595.3-201ENST00000624919 14262 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 AC005224.3-201ENST00000584683 2140 ntBASIC9.12□□□□□ -0.95
CFAP43Q8NDM7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 MRPL53P1-201ENST00000414323 319 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 EIF4A1P7-201ENST00000421800 1220 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 VN1R54P-201ENST00000435210 1049 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 BX284632.1-201ENST00000478218 541 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 AL049872.1-201ENST00000556323 322 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 PPATP2-201ENST00000605635 508 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 PARP4P2-201ENST00000446672 3326 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFAP43Q8NDM7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.1□□□□□ -0.95
CFAP43Q8NDM7 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms