Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC009831.5-201ENST00000624000 3189 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RNA5SP321-201ENST00000362722 111 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RNU6-304P-201ENST00000364855 107 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RNU6-354P-201ENST00000383862 107 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RNU6-610P-201ENST00000384264 107 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 YWHAZP4-201ENST00000392459 708 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL451046.1-201ENST00000406097 534 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RN7SKP278-201ENST00000410504 342 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RN7SKP240-201ENST00000410583 375 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RPL12P16-201ENST00000431098 498 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 NEK4P1-201ENST00000433383 879 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC090018.1-201ENST00000434369 367 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL392003.1-201ENST00000434394 243 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 HMGB1P26-201ENST00000452520 628 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC008379.1-201ENST00000463655 464 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 H3F3AP5-201ENST00000475267 429 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 OR9N1P-201ENST00000491296 333 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC091849.1-201ENST00000509920 121 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC008549.1-201ENST00000512900 643 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC027308.1-201ENST00000517993 110 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC006512.2-201ENST00000543250 486 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL845552.1-201ENST00000556820 323 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC010327.2-201ENST00000587647 488 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL031775.1-201ENST00000607014 887 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC025016.1-201ENST00000616746 682 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL122023.1-201ENST00000622847 530 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC114546.4-201ENST00000624413 369 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AL390318.1-201ENST00000624564 687 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 SNX18P10-201ENST00000625014 519 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC007671.2-201ENST00000637344 619 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC139713.2-210ENST00000641741 992 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 LINC01613-201ENST00000561476 2780 ntBASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEFF1Q8IYR6 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 AL451064.2-201ENST00000623514 1654 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 AC010401.2-201ENST00000575137 4934 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 TCP1P3-201ENST00000414406 1498 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 CASC19-248ENST00000641674 1356 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 RNA5SP433-201ENST00000364491 114 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 RNA5SP77-201ENST00000365394 120 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 U3.52-201ENST00000384034 216 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.75□□□□□ -1.33
TMEFF1Q8IYR6 RNU4-27P-201ENST00000410889 139 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms