Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPS23P6-201ENST00000466136 431 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
GABPAQ06546 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.97□□□□□ -1.29
GABPAQ06546 AL035690.1-201ENST00000490892 383 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AC011411.1-201ENST00000509592 876 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 GAPDHP71-201ENST00000511530 1003 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.97□□□□□ -1.29
GABPAQ06546 DPPA2P4-201ENST00000563717 878 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 TXNP4-201ENST00000575018 310 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 OR11H2-202ENST00000641517 1085 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.97□□□□□ -1.29
GABPAQ06546 AC061975.7-201ENST00000592016 2692 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 AC008957.3-201ENST00000624112 2242 ntBASIC6.97□□□□□ -1.29
GABPAQ06546 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
GABPAQ06546 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
GABPAQ06546 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
GABPAQ06546 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
GABPAQ06546 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
GABPAQ06546 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 AC006511.3-201ENST00000624929 1783 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
GABPAQ06546 RNA5SP394-201ENST00000364216 119 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
GABPAQ06546 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.96□□□□□ -1.3
GABPAQ06546 RN7SKP286-201ENST00000410894 299 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 RN7SKP293-201ENST00000411389 296 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 AC126120.1-201ENST00000431082 470 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
GABPAQ06546 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.96□□□□□ -1.3
GABPAQ06546 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.96□□□□□ -1.3
GABPAQ06546 AL162739.1-201ENST00000450606 307 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 RN7SL717P-201ENST00000478343 297 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 AC023818.1-201ENST00000498379 384 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.96□□□□□ -1.3
GABPAQ06546 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 OR4A42P-201ENST00000531397 938 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.96□□□□□ -1.3
GABPAQ06546 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.96□□□□□ -1.3
GABPAQ06546 AL355974.3-201ENST00000617383 467 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 AP001885.1-201ENST00000621658 558 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.96□□□□□ -1.3
GABPAQ06546 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.96□□□□□ -1.3
GABPAQ06546 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.96□□□□□ -1.3
GABPAQ06546 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
GABPAQ06546 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
GABPAQ06546 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.96□□□□□ -1.3
GABPAQ06546 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
GABPAQ06546 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.95□□□□□ -1.3
GABPAQ06546 ACA64.4-201ENST00000459070 127 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AC018638.3-201ENST00000461273 132 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.95□□□□□ -1.3
GABPAQ06546 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.95□□□□□ -1.3
GABPAQ06546 CYCSP22-201ENST00000517555 339 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.95□□□□□ -1.3
GABPAQ06546 AC244502.2-201ENST00000543361 851 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 SNORD95-201ENST00000579879 68 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AP001496.3-201ENST00000580230 913 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.95□□□□□ -1.3
GABPAQ06546 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 FAM27E4-201ENST00000605259 342 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AL352984.2-201ENST00000611153 546 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 AL139099.4-201ENST00000614802 114 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 RN7SL544P-201ENST00000617232 284 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 RN7SL763P-201ENST00000620922 284 ntBASIC6.95□□□□□ -1.3
GABPAQ06546 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.95□□□□□ -1.3
GABPAQ06546 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
GABPAQ06546 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.95□□□□□ -1.3
GABPAQ06546 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
GABPAQ06546 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 RPS2P45-201ENST00000469997 2057 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
GABPAQ06546 HMGB1P20-201ENST00000402555 677 ntBASIC6.94□□□□□ -1.3
GABPAQ06546 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms