Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL157884.3-201ENST00000448273 1184 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 MTND2P30-201ENST00000456663 382 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 MTND6P32-201ENST00000457611 483 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 SNX18P26-201ENST00000458433 740 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC104629.2-201ENST00000468627 598 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC114728.1-201ENST00000488289 483 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 MRPL57P6-201ENST00000506570 309 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC025768.1-201ENST00000510057 267 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 MRPS5P3-201ENST00000515577 166 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AP001804.2-201ENST00000533932 910 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC073916.1-201ENST00000545095 130 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 TPRX1P1-201ENST00000557620 319 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC007494.1-201ENST00000562293 760 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 MIR744-201ENST00000578242 98 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL671309.1-201ENST00000603750 544 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AL158211.2-201ENST00000607282 395 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CX3CL1P78423 RMST_5.1-201ENST00000618704 126 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC015722.2-201ENST00000622210 551 ntBASIC5.09□□□□□ -1.59
CX3CL1P78423 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CL1P78423 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CL1P78423 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CL1P78423 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CX3CL1P78423 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CX3CL1P78423 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.09□□□□□ -1.6
CX3CL1P78423 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.09□□□□□ -1.6
CX3CL1P78423 AL359976.1-201ENST00000418655 3528 ntBASIC5.09□□□□□ -1.6
CX3CL1P78423 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 AP001002.1-201ENST00000625148 1513 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CX3CL1P78423 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 RNU6-1251P-201ENST00000364502 107 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 RNA5SP485-201ENST00000365053 119 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 HMGA1P8-201ENST00000414130 321 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 NME1P1-201ENST00000420914 382 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 RPS18P1-201ENST00000447840 458 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 VN1R48P-201ENST00000448149 1036 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 CEACAMP11-201ENST00000455211 583 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AL133399.1-201ENST00000527476 298 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.08□□□□□ -1.6
CX3CL1P78423 CKS1BP1-201ENST00000555221 240 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC025283.1-201ENST00000572039 734 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC020978.7-201ENST00000575953 1187 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC005726.4-201ENST00000582858 458 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC073046.2-201ENST00000604756 527 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.08□□□□□ -1.6
CX3CL1P78423 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 GAPDHP41-201ENST00000613707 975 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 AC024255.1-201ENST00000614376 102 ntBASIC5.08□□□□□ -1.6
CX3CL1P78423 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.08□□□□□ -1.6
CX3CL1P78423 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CX3CL1P78423 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CX3CL1P78423 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms