Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN20P56880 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLDN20P56880 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN20P56880 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN20P56880 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 RNA5SP350-201ENST00000363298 111 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 RNU1-65P-201ENST00000363919 148 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 RNU6-670P-201ENST00000364312 104 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 AL121835.1-201ENST00000404250 354 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 RNU2-18P-201ENST00000411224 162 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 GABARAPL3-201ENST00000412799 354 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AL035422.1-201ENST00000414193 397 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 RPL7AP14-201ENST00000424041 802 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 SETP10-201ENST00000424368 814 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 RPS7P14-201ENST00000426405 583 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN20P56880 NDUFA5P1-201ENST00000433858 341 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AL645936.1-201ENST00000441979 518 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 RPL31P53-201ENST00000457065 348 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.68□□□□□ -1.5
CLDN20P56880 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 SNX18P25-201ENST00000510539 758 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLDN20P56880 NPM1P5-201ENST00000557228 838 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN20P56880 AC107993.1-201ENST00000591343 684 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.68□□□□□ -1.5
CLDN20P56880 SMIM12P1-201ENST00000603004 274 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 SNORA74.4-201ENST00000607595 199 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC008833.1-201ENST00000611633 691 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 AC024255.1-201ENST00000614376 102 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.68□□□□□ -1.5
CLDN20P56880 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC106730.3-201ENST00000624568 641 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 AC063952.1-203ENST00000634410 658 ntBASIC5.68□□□□□ -1.5
CLDN20P56880 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.68□□□□□ -1.5
CLDN20P56880 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.68□□□□□ -1.5
CLDN20P56880 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLDN20P56880 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN20P56880 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN20P56880 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
CLDN20P56880 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN20P56880 RN7SKP187-201ENST00000365536 330 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 RBBP4P5-201ENST00000398583 1266 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AL589994.1-201ENST00000404962 340 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 RPL12P43-201ENST00000420608 499 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AC092865.3-201ENST00000425390 1026 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AL590623.1-201ENST00000427864 105 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 SNX18P26-201ENST00000458433 740 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms