Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RPS23P9-201ENST00000448848 438 ntBASIC7.01□□□□□ -1.29
SCN4AP35499 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.01□□□□□ -1.29
SCN4AP35499 PGAM1P13-201ENST00000507497 754 ntBASIC7.01□□□□□ -1.29
SCN4AP35499 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.01□□□□□ -1.29
SCN4AP35499 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.01□□□□□ -1.29
SCN4AP35499 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SCN4AP35499 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.01□□□□□ -1.29
SCN4AP35499 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SCN4AP35499 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7□□□□□ -1.29
SCN4AP35499 AC079841.1-201ENST00000481228 950 ntBASIC7□□□□□ -1.29
SCN4AP35499 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7□□□□□ -1.29
SCN4AP35499 AC015720.2-201ENST00000567709 334 ntBASIC7□□□□□ -1.29
SCN4AP35499 AC079414.3-201ENST00000612986 1090 ntBASIC7□□□□□ -1.29
SCN4AP35499 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 AC005034.3-201ENST00000604845 1747 ntBASIC7□□□□□ -1.29
SCN4AP35499 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7□□□□□ -1.29
SCN4AP35499 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7□□□□□ -1.29
SCN4AP35499 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7□□□□□ -1.29
SCN4AP35499 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7□□□□□ -1.29
SCN4AP35499 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 RPL23P2-201ENST00000320371 421 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 RNU1-106P-201ENST00000384382 164 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 GAPDHP42-201ENST00000406848 981 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 SNORA11-201ENST00000408789 128 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 RPL7P6-201ENST00000480903 738 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AC009120.1-201ENST00000493458 473 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AC072052.1-201ENST00000496556 306 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 IGHV1-14-201ENST00000523391 241 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.99□□□□□ -1.29
SCN4AP35499 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 OR1F2P-201ENST00000570470 933 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 MIR4697-201ENST00000582977 78 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AC008115.3-201ENST00000614874 549 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AP002505.2-201ENST00000623585 696 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SCN4AP35499 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.99□□□□□ -1.29
SCN4AP35499 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 RPL7L1P9-201ENST00000431298 745 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 GSTA7P-201ENST00000438425 448 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 BZW1P1-201ENST00000454901 1240 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 LDHBP2-201ENST00000456969 1005 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 RPEP1-201ENST00000504507 658 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.99□□□□□ -1.29
SCN4AP35499 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCN4AP35499 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SCN4AP35499 MIR4260-201ENST00000583107 67 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AC133644.2-201ENST00000608142 540 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.99□□□□□ -1.29
SCN4AP35499 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SCN4AP35499 AC009120.2-204ENST00000621548 2032 ntBASIC6.99□□□□□ -1.29
SCN4AP35499 FBXL21-201ENST00000297158 1305 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.98□□□□□ -1.29
SCN4AP35499 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCN4AP35499 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.98□□□□□ -1.29
SCN4AP35499 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms