Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.44□□□□□ -1.06
RXRBP28702 HMGN1P6-201ENST00000438508 291 ntBASIC8.44□□□□□ -1.06
RXRBP28702 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 AC112492.1-201ENST00000449607 712 ntBASIC8.44□□□□□ -1.06
RXRBP28702 snoU109.3-201ENST00000459477 145 ntBASIC8.44□□□□□ -1.06
RXRBP28702 RPL35AP28-201ENST00000459730 331 ntBASIC8.44□□□□□ -1.06
RXRBP28702 AC010468.1-201ENST00000461022 817 ntBASIC8.44□□□□□ -1.06
RXRBP28702 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC8.44□□□□□ -1.06
RXRBP28702 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 SETP21-201ENST00000514799 892 ntBASIC8.44□□□□□ -1.06
RXRBP28702 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 OR4A21P-201ENST00000532759 944 ntBASIC8.44□□□□□ -1.06
RXRBP28702 CBX3P7-201ENST00000532876 502 ntBASIC8.44□□□□□ -1.06
RXRBP28702 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 AP002884.5-201ENST00000595053 1132 ntBASIC8.44□□□□□ -1.06
RXRBP28702 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 MIR6809-201ENST00000612189 116 ntBASIC8.44□□□□□ -1.06
RXRBP28702 RPSAP73-201ENST00000614820 330 ntBASIC8.44□□□□□ -1.06
RXRBP28702 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
RXRBP28702 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.44□□□□□ -1.06
RXRBP28702 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.44□□□□□ -1.06
RXRBP28702 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
RXRBP28702 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 MTCO1P22-201ENST00000604619 1360 ntBASIC8.44□□□□□ -1.06
RXRBP28702 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 LINC01963-201ENST00000562038 3148 ntBASIC8.44□□□□□ -1.06
RXRBP28702 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.43□□□□□ -1.06
RXRBP28702 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RXRBP28702 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RXRBP28702 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
RXRBP28702 AL049545.1-201ENST00000401856 572 ntBASIC8.43□□□□□ -1.06
RXRBP28702 RN7SKP59-201ENST00000410520 314 ntBASIC8.43□□□□□ -1.06
RXRBP28702 RAB28P1-201ENST00000411517 641 ntBASIC8.43□□□□□ -1.06
RXRBP28702 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 Z84478.1-201ENST00000438230 1219 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.43□□□□□ -1.06
RXRBP28702 MTND5P8-201ENST00000449817 1083 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AC135721.2-201ENST00000464237 300 ntBASIC8.43□□□□□ -1.06
RXRBP28702 CBX1P5-201ENST00000475330 559 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC8.43□□□□□ -1.06
RXRBP28702 RN7SL184P-201ENST00000488308 297 ntBASIC8.43□□□□□ -1.06
RXRBP28702 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC8.43□□□□□ -1.06
RXRBP28702 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC8.43□□□□□ -1.06
RXRBP28702 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.43□□□□□ -1.06
RXRBP28702 MTND1P5-201ENST00000517906 940 ntBASIC8.43□□□□□ -1.06
RXRBP28702 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC8.43□□□□□ -1.06
RXRBP28702 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.43□□□□□ -1.06
RXRBP28702 SAA3P-201ENST00000533267 365 ntBASIC8.43□□□□□ -1.06
RXRBP28702 GSTP1P1-201ENST00000548078 319 ntBASIC8.43□□□□□ -1.06
RXRBP28702 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC8.43□□□□□ -1.06
RXRBP28702 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC8.43□□□□□ -1.06
RXRBP28702 AL591767.3-201ENST00000554632 525 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AC012414.2-201ENST00000559474 187 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 AC012213.3-201ENST00000577199 777 ntBASIC8.43□□□□□ -1.06
RXRBP28702 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.43□□□□□ -1.06
RXRBP28702 OR7A1P-201ENST00000601206 970 ntBASIC8.43□□□□□ -1.06
RXRBP28702 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.43□□□□□ -1.06
RXRBP28702 AL445670.1-201ENST00000618889 801 ntBASIC8.43□□□□□ -1.06
RXRBP28702 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 AC125238.2-201ENST00000430003 1440 ntBASIC8.43□□□□□ -1.06
RXRBP28702 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.43□□□□□ -1.06
RXRBP28702 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RXRBP28702 MIPEPP2-201ENST00000422560 1819 ntBASIC8.43□□□□□ -1.06
RXRBP28702 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.42□□□□□ -1.06
RXRBP28702 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RXRBP28702 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.42□□□□□ -1.06
RXRBP28702 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms