Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CBX1P3-201ENST00000413296 527 ntBASIC6.06□□□□□ -1.44
CDH3P22223 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.06□□□□□ -1.44
CDH3P22223 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH3P22223 TOMM20P1-201ENST00000534518 427 ntBASIC6.06□□□□□ -1.44
CDH3P22223 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 AC084033.1-201ENST00000550830 633 ntBASIC6.06□□□□□ -1.44
CDH3P22223 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.06□□□□□ -1.44
CDH3P22223 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 RNU6-84P-201ENST00000607737 102 ntBASIC6.06□□□□□ -1.44
CDH3P22223 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 AC092681.3-201ENST00000609463 678 ntBASIC6.06□□□□□ -1.44
CDH3P22223 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 AC002044.3-201ENST00000623314 541 ntBASIC6.06□□□□□ -1.44
CDH3P22223 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 AC007842.1-201ENST00000597336 2039 ntBASIC6.06□□□□□ -1.44
CDH3P22223 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 DDX18P6-201ENST00000450119 1997 ntBASIC6.06□□□□□ -1.44
CDH3P22223 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 AC110373.1-201ENST00000505994 3505 ntBASIC6.05□□□□□ -1.44
CDH3P22223 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH3P22223 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 AL121839.2-201ENST00000565058 6943 ntBASIC6.05□□□□□ -1.44
CDH3P22223 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 CASC19-260ENST00000641828 2001 ntBASIC6.05□□□□□ -1.44
CDH3P22223 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH3P22223 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH3P22223 RPL5P10-201ENST00000445207 894 ntBASIC6.05□□□□□ -1.44
CDH3P22223 SNX18P26-201ENST00000458433 740 ntBASIC6.05□□□□□ -1.44
CDH3P22223 AP005639.1-201ENST00000526939 192 ntBASIC6.05□□□□□ -1.44
CDH3P22223 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH3P22223 MRPS21P8-201ENST00000569196 235 ntBASIC6.05□□□□□ -1.44
CDH3P22223 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 AP005136.2-201ENST00000583253 1049 ntBASIC6.05□□□□□ -1.44
CDH3P22223 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 AC124916.2-201ENST00000604416 224 ntBASIC6.05□□□□□ -1.44
CDH3P22223 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDH3P22223 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH3P22223 IFIT1P1-201ENST00000400497 1449 ntBASIC6.05□□□□□ -1.44
CDH3P22223 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH3P22223 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH3P22223 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CDH3P22223 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 DNM1P47-203ENST00000571780 12667 ntBASIC6.04□□□□□ -1.44
CDH3P22223 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH3P22223 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms