Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC114876.1-201ENST00000490962 1366 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC022325.1-201ENST00000502748 2199 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AL731532.1-201ENST00000623972 4236 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 RNU1-65P-201ENST00000363919 148 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 RNU105B-201ENST00000364478 208 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 PTCD2P2-201ENST00000415579 1095 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 RPL35AP31-201ENST00000418340 337 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 RPSAP65-201ENST00000429660 595 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 SEPT14P12-201ENST00000442280 560 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC010240.2-201ENST00000445363 1205 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AL445687.2-201ENST00000458156 728 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 TPM3P3-201ENST00000521343 354 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC002519.2-203ENST00000567043 837 ntBASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DPA1P20036 AC027575.3-201ENST00000583058 2747 ntBASIC6.15□□□□□ -1.43
HLA-DPA1P20036 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.15□□□□□ -1.43
HLA-DPA1P20036 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-DPA1P20036 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DPA1P20036 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DPA1P20036 AC016583.1-201ENST00000624221 2431 ntBASIC6.15□□□□□ -1.43
HLA-DPA1P20036 ZNF658B-201ENST00000602828 3408 ntBASIC6.15□□□□□ -1.43
HLA-DPA1P20036 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.15□□□□□ -1.43
HLA-DPA1P20036 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 CCAT2-201ENST00000630920 1752 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 MAPK10-261ENST00000641050 3109 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AL121768.1-201ENST00000613917 2544 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RNA5SP375-201ENST00000362975 119 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RN7SKP166-201ENST00000410812 305 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AL445213.1-201ENST00000412589 747 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 MTND4LP17-201ENST00000414607 293 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AL731534.1-201ENST00000434711 269 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 HMGB1P7-201ENST00000450921 612 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RPL23AP40-201ENST00000487630 390 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC021006.1-201ENST00000489849 553 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC018797.1-201ENST00000510791 255 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 CR383658.1-201ENST00000514609 734 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 RNA5SP473-201ENST00000516402 125 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC130364.2-201ENST00000528639 604 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 AC016839.1-201ENST00000578162 867 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 GLYATL1P2-202ENST00000588046 902 ntBASIC6.14□□□□□ -1.43
HLA-DPA1P20036 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DPA1P20036 FAM27E2-201ENST00000619668 403 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms