Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AL589826.1-201ENST00000340697 249 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 HMGA1P8-201ENST00000414130 321 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 METTL15P3-201ENST00000415522 1221 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 AL713922.1-201ENST00000416477 747 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 RANP7-201ENST00000418085 644 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 OR52B5P-201ENST00000435337 951 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 RPS26P41-201ENST00000450370 284 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC021074.2-201ENST00000468434 172 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC009120.1-201ENST00000493458 473 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC106800.2-201ENST00000514009 1103 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 SCARNA6.1-201ENST00000516989 238 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 OR52B5P-202ENST00000641118 1110 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 BIN2P1-201ENST00000504996 1530 ntBASIC8.93□□□□□ -0.98
RAPGEF3O95398 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
RAPGEF3O95398 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RAPGEF3O95398 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 AC105114.1-201ENST00000624795 1862 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 MIR141-201ENST00000384975 95 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 AL589647.1-201ENST00000402485 466 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 FAR2P1-206ENST00000449736 709 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 HIGD1AP8-201ENST00000453927 274 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 RPL7P39-201ENST00000481157 744 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 AC095057.1-201ENST00000507583 168 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RAPGEF3O95398 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RAPGEF3O95398 AC012213.2-201ENST00000562917 4597 ntBASIC8.92□□□□□ -0.98
RAPGEF3O95398 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC019070.1-201ENST00000415008 1024 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 RPS4XP5-201ENST00000419038 768 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC113412.1-201ENST00000425840 504 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC104164.1-201ENST00000460282 590 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 RN7SL97P-201ENST00000486780 299 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC021146.10-201ENST00000515628 706 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 AL671862.1-201ENST00000515851 349 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 HNRNPCP1-201ENST00000556181 766 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AL023583.1-201ENST00000607518 1143 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 AL354696.1-201ENST00000614652 497 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
RAPGEF3O95398 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.91□□□□□ -0.98
RAPGEF3O95398 AL157831.2-201ENST00000564681 3095 ntBASIC8.91□□□□□ -0.98
RAPGEF3O95398 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms