Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RNA5SP88-201ENST00000365560 109 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC007066.1-201ENST00000392902 381 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 NPM1P46-201ENST00000399556 865 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RPS3AP23-201ENST00000401762 784 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL080285.1-201ENST00000404225 984 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU2-42P-201ENST00000410697 113 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AP001324.1-201ENST00000428553 399 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC002069.1-201ENST00000429649 1159 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MTND4LP10-201ENST00000435146 291 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 UBE2FP3-201ENST00000436366 524 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL606490.1-201ENST00000452266 765 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AP000852.1-201ENST00000472460 573 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC090013.1-201ENST00000485147 480 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL416P-201ENST00000494042 298 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC138409.2-202ENST00000507274 458 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 STMN1P2-201ENST00000508435 439 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 OR51A1P-201ENST00000511110 946 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-1004P-201ENST00000516584 111 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 IGHVIII-82-201ENST00000522058 250 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC091175.1-201ENST00000522168 572 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 CR383656.6-201ENST00000550518 394 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 UBE2FP2-201ENST00000566646 462 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MIR3714-201ENST00000579507 65 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL121890.2-201ENST00000617644 465 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 U6.107-201ENST00000637108 79 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL359091.1-201ENST00000449048 1734 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AL512662.1-201ENST00000624850 2251 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF733P-202ENST00000444809 1573 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 CDYLP1-201ENST00000419017 1458 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC020549.1-201ENST00000536916 1440 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092725.2-201ENST00000567658 1389 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 TMSB4XP4-201ENST00000323496 618 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 Y_RNA.372-201ENST00000365599 102 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL590143.1-201ENST00000405071 138 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PPIAP2-201ENST00000414143 492 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 BMP2KL-201ENST00000414251 1225 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 HMGB3P23-201ENST00000414981 585 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms