Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SL464P-201ENST00000492743 297 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC104136.1-201ENST00000512969 394 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RN7SKP116-201ENST00000516902 319 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RNU6-943P-201ENST00000516960 98 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RN7SKP183-201ENST00000517169 324 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 RNF185-AS1-201ENST00000526089 353 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC092747.2-201ENST00000545069 983 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 COX4I1P1-201ENST00000554239 509 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC091488.1-201ENST00000604239 660 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RPS28P1-201ENST00000604589 187 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 BNIP3P15-201ENST00000604600 301 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC135050.6-202ENST00000613584 392 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AC018692.2-201ENST00000624130 348 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 ANKRD26P2-201ENST00000445530 1710 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.71□□□□□ -1.02
LRCH3Q96II8 AL031651.1-201ENST00000615357 1438 ntBASIC8.71□□□□□ -1.02
LRCH3Q96II8 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LRCH3Q96II8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC010200.1-201ENST00000547380 1454 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 SNORA33.2-201ENST00000365413 134 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 RNU4-70P-201ENST00000384579 139 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC245036.1-201ENST00000391727 309 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC092952.1-201ENST00000397646 1209 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 RPL12P27-201ENST00000414870 496 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 TIMM8AP1-201ENST00000419283 295 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC064862.5-201ENST00000440618 334 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 CALM1P1-201ENST00000442082 433 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC004801.2-201ENST00000468202 779 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC091544.1-201ENST00000484702 348 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 NIFKP7-201ENST00000503365 834 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 HMGB1P29-201ENST00000505659 499 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 Y_RNA.693-201ENST00000516641 110 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 OR5M7P-201ENST00000526140 972 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 OSBPL9P2-201ENST00000526582 1228 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 OR5AP1P-201ENST00000529730 940 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC023310.2-201ENST00000553844 547 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 DNAJC8P1-201ENST00000554535 372 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC090826.1-203ENST00000569235 490 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC005262.1-201ENST00000588562 362 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC011921.2-201ENST00000589465 152 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 VDAC1P5-201ENST00000603132 844 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC005332.6-201ENST00000613178 446 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 AC090971.5-201ENST00000621102 293 ntBASIC8.7□□□□□ -1.02
LRCH3Q96II8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LRCH3Q96II8 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
LRCH3Q96II8 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms