Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 AL158152.1-201ENST00000602652 1435 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRRC28Q86X40 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRRC28Q86X40 AC109446.4-201ENST00000623235 2755 ntBASIC5.38□□□□□ -1.55
LRRC28Q86X40 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC239868.2-201ENST00000564237 4527 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 NPM1P38-201ENST00000403835 865 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC002127.1-201ENST00000421305 225 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 EMC3-AS1-205ENST00000438698 534 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC016908.1-201ENST00000442571 1219 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 POU5F1P5-201ENST00000445059 658 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC118758.1-202ENST00000454719 225 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC073594.1-201ENST00000462065 364 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 RN7SL643P-201ENST00000471845 291 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 RN7SL362P-201ENST00000494228 267 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC113367.2-201ENST00000505749 160 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 OOSP1P2-201ENST00000579644 351 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC073046.2-201ENST00000604756 527 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 MIR7109-201ENST00000613748 65 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 AL591926.1-201ENST00000620542 217 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 CASC19-274ENST00000642018 970 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 BCORP1-203ENST00000513194 5093 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 AC016745.2-201ENST00000608834 3443 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 CASC19-246ENST00000641625 1606 ntBASIC5.37□□□□□ -1.55
LRRC28Q86X40 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC28Q86X40 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRRC28Q86X40 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 ADAM24P-201ENST00000398655 2101 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 AC005224.3-201ENST00000584683 2140 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC28Q86X40 RPL11P4-201ENST00000332269 436 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 RN7SKP187-201ENST00000365536 330 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 AL139805.1-201ENST00000407837 289 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 METTL15P3-201ENST00000415522 1221 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 OSTCP4-201ENST00000424397 449 ntBASIC5.36□□□□□ -1.55
LRRC28Q86X40 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC28Q86X40 SUMO2P8-201ENST00000434672 286 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms