Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 RN7SL57P-201ENST00000493687 290 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 OR4A40P-201ENST00000533878 948 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AC079414.3-201ENST00000612986 1090 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 AL049767.1-202ENST00000637826 242 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 MIR193BHG-214ENST00000641765 509 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 PARP4P2-201ENST00000446672 3326 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 LINC01616-201ENST00000561816 2280 ntBASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.02□□□□□ -1.29
SHROOM1Q2M3G4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AL662795.2-201ENST00000624252 3706 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC130360.2-201ENST00000533477 1556 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RNA5SP394-201ENST00000364216 119 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RN7SKP128-201ENST00000364270 303 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 HMGB1P20-201ENST00000402555 677 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 OR6M2P-201ENST00000529831 871 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC027026.1-201ENST00000532323 742 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC079600.1-201ENST00000550326 297 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 SHQ1P1-201ENST00000437111 1544 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 CIR1P2-201ENST00000514821 1342 ntBASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SHROOM1Q2M3G4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC092692.1-201ENST00000623625 2595 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 RNA5SP350-201ENST00000363298 111 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 RN7SKP278-201ENST00000410504 342 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 PTCD2P2-201ENST00000415579 1095 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC017078.1-201ENST00000416146 368 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 GTF3AP1-201ENST00000416942 1004 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 BMS1P13-201ENST00000417301 885 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC126120.1-201ENST00000431082 470 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AL445928.1-201ENST00000435545 222 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 KRTAP8-2P-201ENST00000440620 186 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 SDC4P-201ENST00000453285 601 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 RPS27AP2-201ENST00000457576 465 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC026254.2-201ENST00000475295 371 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC074386.1-201ENST00000476560 767 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7□□□□□ -1.29
SHROOM1Q2M3G4 RPL7L1P4-201ENST00000513004 707 ntBASIC7□□□□□ -1.29
SHROOM1Q2M3G4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms