Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RHBDL3P58872 RNA5SP271-201ENST00000516700 88 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 IGLVIV-64-201ENST00000518581 301 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.36□□□□□ -1.23
RHBDL3P58872 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.36□□□□□ -1.23
RHBDL3P58872 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.36□□□□□ -1.23
RHBDL3P58872 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC090236.2-201ENST00000587933 1101 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 KATNBL1P1-201ENST00000605192 748 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 AC239803.2-201ENST00000610161 430 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 AL731556.1-201ENST00000394628 3711 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC003985.2-201ENST00000562268 1669 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RHBDL3P58872 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 RNU1-150P-201ENST00000362491 162 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 RNA5SP435-201ENST00000364044 108 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RHBDL3P58872 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC234781.4-201ENST00000419384 244 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 AC009237.1-201ENST00000442127 744 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 TXNP2-201ENST00000443918 295 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 ZNF619P1-201ENST00000446539 752 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.35□□□□□ -1.23
RHBDL3P58872 PSMA2P2-201ENST00000504319 686 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC022826.1-201ENST00000519383 805 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.35□□□□□ -1.23
RHBDL3P58872 OR4V1P-201ENST00000525394 1140 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.35□□□□□ -1.23
RHBDL3P58872 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.35□□□□□ -1.23
RHBDL3P58872 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.35□□□□□ -1.23
RHBDL3P58872 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 AL357562.1-201ENST00000624911 609 ntBASIC7.35□□□□□ -1.23
RHBDL3P58872 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.35□□□□□ -1.23
RHBDL3P58872 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RHBDL3P58872 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AF287957.1-201ENST00000607368 1595 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RHBDL3P58872 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 AL031985.1-201ENST00000392713 418 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RHBDL3P58872 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.34□□□□□ -1.23
RHBDL3P58872 RPL23AP19-201ENST00000436229 369 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 NDUFS5P5-201ENST00000437256 321 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 VN1R110P-201ENST00000438988 971 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.34□□□□□ -1.23
RHBDL3P58872 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.34□□□□□ -1.23
RHBDL3P58872 OR2AF1P-201ENST00000454899 889 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 SETP20-201ENST00000457046 852 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 MTND6P32-201ENST00000457611 483 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.34□□□□□ -1.23
RHBDL3P58872 RPL7P51-201ENST00000490532 749 ntBASIC7.34□□□□□ -1.23
RHBDL3P58872 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms