Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AC083899.2-201ENST00000423285 1376 ntBASIC5.81□□□□□ -1.48
CENPAP49450 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AC110373.1-201ENST00000505994 3505 ntBASIC5.81□□□□□ -1.48
CENPAP49450 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 SAMMSON-213ENST00000641336 1521 ntBASIC5.81□□□□□ -1.48
CENPAP49450 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AMZ2P2-201ENST00000406819 1057 ntBASIC5.81□□□□□ -1.48
CENPAP49450 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AL139135.1-201ENST00000412675 209 ntBASIC5.81□□□□□ -1.48
CENPAP49450 RANP6-201ENST00000413691 644 ntBASIC5.81□□□□□ -1.48
CENPAP49450 PPIAP23-201ENST00000420099 497 ntBASIC5.81□□□□□ -1.48
CENPAP49450 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AL672212.1-201ENST00000422246 400 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL139184.1-202ENST00000422303 222 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 MTND1P10-201ENST00000426108 832 ntBASIC5.81□□□□□ -1.48
CENPAP49450 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.81□□□□□ -1.48
CENPAP49450 MTND6P5-201ENST00000448266 512 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CENPAP49450 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 AC093878.1-201ENST00000515630 432 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AC096661.1-201ENST00000515870 822 ntBASIC5.81□□□□□ -1.48
CENPAP49450 Vault.2-201ENST00000516519 98 ntBASIC5.81□□□□□ -1.48
CENPAP49450 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AP001804.1-201ENST00000526868 919 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AC134349.2-201ENST00000535136 910 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.81□□□□□ -1.48
CENPAP49450 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.81□□□□□ -1.48
CENPAP49450 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AC024589.2-201ENST00000605642 1294 ntBASIC5.81□□□□□ -1.48
CENPAP49450 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 AC084824.5-201ENST00000612009 413 ntBASIC5.81□□□□□ -1.48
CENPAP49450 MIR8082-201ENST00000612488 81 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AP003108.4-201ENST00000623917 878 ntBASIC5.81□□□□□ -1.48
CENPAP49450 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 AC012254.3-201ENST00000591183 2117 ntBASIC5.81□□□□□ -1.48
CENPAP49450 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.81□□□□□ -1.48
CENPAP49450 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CENPAP49450 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CENPAP49450 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 NEK2P2-201ENST00000438441 1338 ntBASIC5.8□□□□□ -1.48
CENPAP49450 PSMC1P4-201ENST00000515236 1327 ntBASIC5.8□□□□□ -1.48
CENPAP49450 AP000473.2-201ENST00000602659 1537 ntBASIC5.8□□□□□ -1.48
CENPAP49450 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CENPAP49450 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.8□□□□□ -1.48
CENPAP49450 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.8□□□□□ -1.48
CENPAP49450 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CENPAP49450 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CENPAP49450 RNU11-201ENST00000387069 134 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RAB5CP1-201ENST00000395972 580 ntBASIC5.8□□□□□ -1.48
CENPAP49450 CCNB2P1-201ENST00000399411 1150 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RNA5SP251-201ENST00000410614 137 ntBASIC5.8□□□□□ -1.48
CENPAP49450 RN7SKP91-201ENST00000410852 288 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms