Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 BTBD7P2-201ENST00000441962 620 ntBASIC5.2□□□□□ -1.58
CDX1P47902 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 TPRKBP1-201ENST00000456243 481 ntBASIC5.2□□□□□ -1.58
CDX1P47902 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 AC091544.1-201ENST00000484702 348 ntBASIC5.2□□□□□ -1.58
CDX1P47902 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 RN7SL284P-201ENST00000498823 275 ntBASIC5.2□□□□□ -1.58
CDX1P47902 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.2□□□□□ -1.58
CDX1P47902 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 AC136777.2-201ENST00000522979 358 ntBASIC5.2□□□□□ -1.58
CDX1P47902 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 BTG1P1-201ENST00000540396 508 ntBASIC5.2□□□□□ -1.58
CDX1P47902 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDX1P47902 AC074029.2-201ENST00000551045 634 ntBASIC5.2□□□□□ -1.58
CDX1P47902 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 AC005519.1-201ENST00000554490 601 ntBASIC5.2□□□□□ -1.58
CDX1P47902 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 MIR4732-201ENST00000581873 76 ntBASIC5.2□□□□□ -1.58
CDX1P47902 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 MIR212-201ENST00000586026 110 ntBASIC5.2□□□□□ -1.58
CDX1P47902 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.2□□□□□ -1.58
CDX1P47902 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.2□□□□□ -1.58
CDX1P47902 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.2□□□□□ -1.58
CDX1P47902 RMST_5.1-201ENST00000618704 126 ntBASIC5.2□□□□□ -1.58
CDX1P47902 RAB28P4-201ENST00000622233 665 ntBASIC5.2□□□□□ -1.58
CDX1P47902 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 AC022325.1-201ENST00000502748 2199 ntBASIC5.2□□□□□ -1.58
CDX1P47902 AC007012.2-201ENST00000623206 1676 ntBASIC5.2□□□□□ -1.58
CDX1P47902 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 FANCD2P2-201ENST00000437591 1400 ntBASIC5.2□□□□□ -1.58
CDX1P47902 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.2□□□□□ -1.58
CDX1P47902 MAPK10-338ENST00000641647 3362 ntBASIC5.2□□□□□ -1.58
CDX1P47902 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CDX1P47902 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.2□□□□□ -1.58
CDX1P47902 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.2□□□□□ -1.58
CDX1P47902 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CDX1P47902 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDX1P47902 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.19□□□□□ -1.58
CDX1P47902 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDX1P47902 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 PROS2P-201ENST00000474651 1951 ntBASIC5.19□□□□□ -1.58
CDX1P47902 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 VIM2P-201ENST00000402383 1294 ntBASIC5.19□□□□□ -1.58
CDX1P47902 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDX1P47902 UBTFL2-201ENST00000411859 1191 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 MTATP6P19-201ENST00000413797 659 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 FAM183DP-201ENST00000421987 399 ntBASIC5.19□□□□□ -1.58
CDX1P47902 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDX1P47902 AC245452.2-201ENST00000435222 392 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AL645939.3-201ENST00000435408 225 ntBASIC5.19□□□□□ -1.58
CDX1P47902 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 GAPDHP37-201ENST00000442317 968 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 CCRL1P1-201ENST00000449542 1053 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 MTND2P3-201ENST00000452458 470 ntBASIC5.19□□□□□ -1.58
CDX1P47902 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CDX1P47902 AC015524.1-201ENST00000491585 472 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.19□□□□□ -1.58
CDX1P47902 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.19□□□□□ -1.58
CDX1P47902 OR52H2P-201ENST00000514607 902 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AC138517.1-201ENST00000515724 568 ntBASIC5.19□□□□□ -1.58
CDX1P47902 RNU6-760P-201ENST00000516078 97 ntBASIC5.19□□□□□ -1.58
CDX1P47902 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.19□□□□□ -1.58
CDX1P47902 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.19□□□□□ -1.58
CDX1P47902 OR9G2P-201ENST00000533326 880 ntBASIC5.19□□□□□ -1.58
CDX1P47902 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDX1P47902 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.19□□□□□ -1.58
CDX1P47902 SNORD39.2-201ENST00000579995 76 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms