Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL049779.2-201ENST00000553847 315 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A5P29400 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 AC079753.1-201ENST00000623243 3868 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.92□□□□□ -1.3
COL4A5P29400 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 AC007938.2-201ENST00000604666 2634 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.92□□□□□ -1.3
COL4A5P29400 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL4A5P29400 RPS6P23-201ENST00000413224 722 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.92□□□□□ -1.3
COL4A5P29400 AL807761.1-201ENST00000417622 171 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 NIFKP3-201ENST00000417799 865 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.92□□□□□ -1.3
COL4A5P29400 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.92□□□□□ -1.3
COL4A5P29400 PRUNEP1-201ENST00000425846 705 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 VN1R54P-201ENST00000435210 1049 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.92□□□□□ -1.3
COL4A5P29400 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 RN7SL570P-201ENST00000484405 292 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.92□□□□□ -1.3
COL4A5P29400 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.92□□□□□ -1.3
COL4A5P29400 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.92□□□□□ -1.3
COL4A5P29400 AC106730.2-201ENST00000566641 540 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.92□□□□□ -1.3
COL4A5P29400 RBM22P1-201ENST00000578589 1214 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.92□□□□□ -1.3
COL4A5P29400 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL4A5P29400 AP000550.3-201ENST00000637734 379 ntBASIC6.92□□□□□ -1.3
COL4A5P29400 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL4A5P29400 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL4A5P29400 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
COL4A5P29400 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A5P29400 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL4A5P29400 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A5P29400 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL4A5P29400 HMGB1P32-201ENST00000425971 565 ntBASIC6.91□□□□□ -1.3
COL4A5P29400 AL451136.1-201ENST00000435399 325 ntBASIC6.91□□□□□ -1.3
COL4A5P29400 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.91□□□□□ -1.3
COL4A5P29400 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.91□□□□□ -1.3
COL4A5P29400 RN7SKP288-201ENST00000516227 268 ntBASIC6.91□□□□□ -1.3
COL4A5P29400 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A5P29400 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A5P29400 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.91□□□□□ -1.3
COL4A5P29400 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A5P29400 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.91□□□□□ -1.3
COL4A5P29400 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL4A5P29400 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL4A5P29400 AC006058.1-201ENST00000568686 5067 ntBASIC6.91□□□□□ -1.3
COL4A5P29400 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 MTHFD2P5-201ENST00000320415 844 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AC005294.1-201ENST00000355509 281 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL4A5P29400 AL645733.1-201ENST00000402250 217 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A5P29400 OR13K1P-201ENST00000444577 975 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AL162739.1-201ENST00000450606 307 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 RAB28P2-201ENST00000454299 641 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 RPL7P45-201ENST00000455851 743 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.9□□□□□ -1.3
COL4A5P29400 AP000676.2-201ENST00000529711 301 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A5P29400 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.9□□□□□ -1.3
COL4A5P29400 AC100827.5-201ENST00000615883 426 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AL355974.3-201ENST00000617383 467 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 TCL6_3.1-201ENST00000619064 137 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 AL121768.1-201ENST00000613917 2544 ntBASIC6.9□□□□□ -1.3
COL4A5P29400 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.9□□□□□ -1.3
COL4A5P29400 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.9□□□□□ -1.3
COL4A5P29400 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL4A5P29400 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL4A5P29400 NCOA4P3-201ENST00000513203 1877 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms