Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.46□□□□□ -1.06
RXRBP28702 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC8.46□□□□□ -1.06
RXRBP28702 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.46□□□□□ -1.06
RXRBP28702 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AC245036.5-201ENST00000596330 847 ntBASIC8.46□□□□□ -1.06
RXRBP28702 IMMP1LP3-201ENST00000604197 224 ntBASIC8.46□□□□□ -1.06
RXRBP28702 AL136228.1-201ENST00000622221 319 ntBASIC8.46□□□□□ -1.06
RXRBP28702 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.46□□□□□ -1.06
RXRBP28702 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.46□□□□□ -1.06
RXRBP28702 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 HCG18-244ENST00000602516 2890 ntBASIC8.46□□□□□ -1.06
RXRBP28702 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.46□□□□□ -1.06
RXRBP28702 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RXRBP28702 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.46□□□□□ -1.06
RXRBP28702 AC023245.2-201ENST00000530760 2978 ntBASIC8.46□□□□□ -1.06
RXRBP28702 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.46□□□□□ -1.06
RXRBP28702 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.46□□□□□ -1.06
RXRBP28702 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 TMEM75-201ENST00000624314 2165 ntBASIC8.45□□□□□ -1.06
RXRBP28702 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 MAPK10-371ENST00000641952 5209 ntBASIC8.45□□□□□ -1.06
RXRBP28702 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 AC245505.2-201ENST00000553572 3055 ntBASIC8.45□□□□□ -1.06
RXRBP28702 SKINT1L-201ENST00000401057 817 ntBASIC8.45□□□□□ -1.06
RXRBP28702 VN1R51P-201ENST00000411675 945 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC245096.1-201ENST00000413104 546 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC019205.1-201ENST00000421830 730 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AL590762.4-201ENST00000425885 253 ntBASIC8.45□□□□□ -1.06
RXRBP28702 MTND1P20-201ENST00000430341 950 ntBASIC8.45□□□□□ -1.06
RXRBP28702 NPM1P48-201ENST00000436002 853 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AL645931.1-201ENST00000439737 410 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 USP9YP10-201ENST00000454868 628 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 RN7SL30P-201ENST00000488416 306 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC008953.1-201ENST00000497334 318 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 GAPDHP71-201ENST00000511530 1003 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC010486.3-201ENST00000511602 785 ntBASIC8.45□□□□□ -1.06
RXRBP28702 USP9YP5-201ENST00000511770 630 ntBASIC8.45□□□□□ -1.06
RXRBP28702 SNORD116-30-201ENST00000516468 85 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 SOX5P1-201ENST00000524155 1127 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC007834.2-201ENST00000536310 343 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC8.45□□□□□ -1.06
RXRBP28702 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 AC005244.1-201ENST00000582566 339 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC111186.1-201ENST00000604684 130 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC097467.4-201ENST00000605504 141 ntBASIC8.45□□□□□ -1.06
RXRBP28702 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 AC018692.2-201ENST00000624130 348 ntBASIC8.45□□□□□ -1.06
RXRBP28702 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 LINC02211-204ENST00000642024 1070 ntBASIC8.45□□□□□ -1.06
RXRBP28702 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
RXRBP28702 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.45□□□□□ -1.06
RXRBP28702 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.45□□□□□ -1.06
RXRBP28702 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RXRBP28702 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.44□□□□□ -1.06
RXRBP28702 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
RXRBP28702 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RXRBP28702 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RXRBP28702 CASP3-203ENST00000393588 677 ntTSL 4 BASIC8.44□□□□□ -1.06
RXRBP28702 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms