Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR52I1-201ENST00000450052 1050 ntBASIC6.08□□□□□ -1.44
CDH3P22223 AC108751.3-201ENST00000461814 1020 ntBASIC6.08□□□□□ -1.44
CDH3P22223 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH3P22223 RN7SL326P-201ENST00000477493 296 ntBASIC6.08□□□□□ -1.44
CDH3P22223 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH3P22223 AC095052.1-201ENST00000509955 863 ntBASIC6.08□□□□□ -1.44
CDH3P22223 AC010343.2-201ENST00000510162 224 ntBASIC6.08□□□□□ -1.44
CDH3P22223 TRAV11-201ENST00000539512 339 ntBASIC6.08□□□□□ -1.44
CDH3P22223 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH3P22223 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH3P22223 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.08□□□□□ -1.44
CDH3P22223 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 AL008723.3-201ENST00000608926 449 ntBASIC6.08□□□□□ -1.44
CDH3P22223 AC093388.1-201ENST00000609166 430 ntBASIC6.08□□□□□ -1.44
CDH3P22223 MIR6071-201ENST00000616741 78 ntBASIC6.08□□□□□ -1.44
CDH3P22223 AC016745.2-201ENST00000608834 3443 ntBASIC6.08□□□□□ -1.44
CDH3P22223 MTCO1P7-201ENST00000419523 1542 ntBASIC6.08□□□□□ -1.44
CDH3P22223 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 AC105235.1-201ENST00000623208 1816 ntBASIC6.08□□□□□ -1.44
CDH3P22223 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH3P22223 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH3P22223 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH3P22223 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH3P22223 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH3P22223 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH3P22223 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH3P22223 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH3P22223 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 OR56A4-201ENST00000330728 1209 ntBASIC6.07□□□□□ -1.44
CDH3P22223 RNA5SP478-201ENST00000364657 115 ntBASIC6.07□□□□□ -1.44
CDH3P22223 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 RNA5SP431-201ENST00000410312 120 ntBASIC6.07□□□□□ -1.44
CDH3P22223 U3.43-201ENST00000410734 213 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 AL354707.3-201ENST00000427308 331 ntBASIC6.07□□□□□ -1.44
CDH3P22223 RPL5P2-201ENST00000429598 854 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH3P22223 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 VN1R96P-201ENST00000446052 858 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 AL133351.3-201ENST00000454998 193 ntBASIC6.07□□□□□ -1.44
CDH3P22223 VPS25P1-201ENST00000455691 508 ntBASIC6.07□□□□□ -1.44
CDH3P22223 SLC25A51P1-201ENST00000468432 871 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC092824.1-201ENST00000483524 576 ntBASIC6.07□□□□□ -1.44
CDH3P22223 ASNSP4-201ENST00000511103 447 ntBASIC6.07□□□□□ -1.44
CDH3P22223 IGHV1-14-201ENST00000523391 241 ntBASIC6.07□□□□□ -1.44
CDH3P22223 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 AC006512.2-201ENST00000543250 486 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AC009120.3-201ENST00000563335 499 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH3P22223 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 AL136097.3-201ENST00000611097 505 ntBASIC6.07□□□□□ -1.44
CDH3P22223 AC073488.6-201ENST00000632293 754 ntBASIC6.07□□□□□ -1.44
CDH3P22223 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH3P22223 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDH3P22223 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDH3P22223 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDH3P22223 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH3P22223 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CDH3P22223 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CDH3P22223 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDH3P22223 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH3P22223 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDH3P22223 RNA5SP346-201ENST00000363541 121 ntBASIC6.06□□□□□ -1.44
CDH3P22223 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH3P22223 TMA16P2-201ENST00000413187 601 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms